FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++AKEL L+ PP G DD A I GPA +PY GVF + + D+P PPK F TKI+HPNI NG IC++ LK W+P+L L VL+ + LL + P+ L + + + +Y AR +T +A Sbjct: 5 KRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYA 147
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F TKI+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + + E+Y R AR +T +A Sbjct: 3 LKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL+ L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y AR +T +A Sbjct: 3 LKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K L P GI N D+ A I GP TP+E+G FR+ L + +P+ PP F++K+FHPNI NGE+C++ L+ W+P+ + +L V+ LL +P P S N A ++ EN +EY R + Sbjct: 7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVK 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL+ L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E Y + AR +T +A Sbjct: 3 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 52/157 (33.12%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD----WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFSQE 697 + +L +EL+ L++ PP G+ N+ + + A I G +G+PYE G+F +++++ +P PPK FLT I+HPNI + G IC++ LK W P+L + VL ++ L+ EP P+ L N + +A+ +T HA P P+ S + Sbjct: 4 VSRLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHALPAPQGSDK 160
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD----WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFSQE 697 +L KEL L PP GI D + + A I G A TPYE GVF +++++ +P PP+ FLT I+HPNI ++G IC++ LK W PSL + VL ++ L+ EP P+ L N + + A+ +T HA+ K K +E Sbjct: 6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHARQKQKADEE 160
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +++ KELK L PP G +D A I GP +PY GVF + + D+P PPK F TK+FHPNI +NG IC++ LK W+P+L + VL+ + LL +P P+ L + + + +Y AR +T +A Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K L E PP G+ D++ A I GP TP+E+G F++ + + ++P+ PP F++K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL +P P S N A ++ EN EY + + Sbjct: 7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVK 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |