FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L + PP G +D A I GP +PY+ G F + + ++P PPK F T+I+HPN+ +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R AR +T +A Sbjct: 3 LKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L + PP G +D A I GP +PY+ G F + + ++P PPK F T+I+HPN+ +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R AR +T +A Sbjct: 3 LKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 44/136 (32.35%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K + E P G+ D+ A I GPA TPYE+G FR+ L ++P+ PP FL+++FHPN+ NGEIC++ L+ W P+ + +L ++ L +P P S N +A + ++ +Y + + Sbjct: 7 RRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVK 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 47/143 (32.87%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +++ KE + L P GIK ++ + I GP +P+E G F+++L L ++P + PK F+TKI+HPN+ +G IC++ LK W+P+L +R VL+ ++ LL P P+ L + N + AR +T ++A Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K + PP G+ D+ T A I GPA TP+E+G FR+ + +P+ PP F++++FHPN+ GE+C++ L+ W+P+ + VL ++ LL +P S N +A + +N +EY + R Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVR 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 K++ +E+ L+ PP G D+ A I GP+GTPYE G+F + ++ D+P PPK F T+I+H N+ T G++ VN L+ W+P+L + VL +R + ++P P S ++ L + E++ A+ +T AK Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGV-NDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 +++L KE K L E+ P+GI G N+DDF T I+GP GTP+E G++ L D+P PP F + FHPN+ +G +C++ L + W+P + +L+ V +L EP ES N A KM E+ EEY R R Sbjct: 7 LRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVR 157
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +++ KE + L P GIK ++ + I GP +P+E G F+++L L ++P + PK F+TKI+HPN+ G IC++ LK W+P+L +R VL+ ++ LL P P+ L + N + AR +T ++A Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYA 148
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 49/151 (32.45%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 221 NLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 N+ IK+ KE+ +E+ IKV + D++F+ + +I GP TPYE G +++++ + +P +PPK F+TKI+HPNI++ G IC++ LK W ++ LR VL+ ++ LL P+ + +N E + + AR++ ++A Sbjct: 3 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 49/151 (32.45%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 221 NLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 N+ IK+ KE+ +E+ IKV + D++F+ + +I GP TPYE G +++++ + +P +PPK F+TKI+HPNI++ G IC++ LK W ++ LR VL+ ++ LL P+ + +N E + + AR++ ++A Sbjct: 3 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |