FC875581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.577e-38 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 174 TTHSFPTQCSTKRLDVAEFAGLR----------ANAGATYATGARDAS--FFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFV 674 +T S CS R A+F+GL+ A G+ + G DA+ FF+AV P + + +K ++VAINGFGRIGRNF+RCW GR DS +DVV +ND+ GVK ASHLLKYDS+LGTF +DV + ++I+VDGK IKVVSNR+PL+LPW E+ IDIV+E TGVFV Sbjct: 12 STSSKSAVCSG-RSSFAQFSGLKKVNNTARLQTAEQGSAFG-GVSDANDAFFNAVNTMGAPARTSNAPSMK------VRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTSGVKTASHLLKYDSILGTFDSDV-VAGEDSITVDGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFV 181
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.792e-38 Identity = 86/162 (53.09%), Postives = 110/162 (67.90%), Query Frame = 3 Query: 210 RLDVAEFAGLRANAGATYATGARDASFF-------DAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFV 674 R A+F+G++ ++ A+ S F DA +++ VAA P K ++VAINGFGRIGRNF+RCW GR DS ++VV +ND+ GVK ASHLLKYDS+LGTF ADV +TISV+GK IK+VSNR+PLQLPW E+ IDIV+E TGVFV Sbjct: 24 RSTFAQFSGMKKVNQSSRLQPAQSGSAFGGYSDANDAFYTRVSGIVAATFGPTMK-----VRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTSGVKTASHLLKYDSILGTFDADVS-AGEDTISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFV 179
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.578e-34 Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 384 NGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFV 674 NGFGRIGRNFLRC R++S L+V+ +NDSGGVK ASHLLKYDS LG F ADVKIVD+ ISV+GK I+VVS+RDP +LPW E+ ID+VIEGTGVF+ Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDADVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFI 97
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.282e-29 Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 3 Query: 372 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFV 674 +VAINGFGRIGRNFLRCW GR DS L+VV +ND+ + +HLL+YDS+LG AD+ D +I+V+GK IK VS+R+PL LPWAE +D+VIE TGVFV Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGINDTSDPRTNAHLLRYDSMLGKLDADIS-ADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFV 102
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 369 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFV 674 ++VAINGFGRIGRNF RCW GR+++ +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVFV Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFV 103
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26 Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 369 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVF 671 ++VAINGFGRIGRNF RCW GR++S +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVF Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVF 102
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 3 Query: 369 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVF 671 ++V INGFGRIGRN+ R + + +++V VND G +HLLKYD++LG KA+V + +TI+VDGK IKV+S R+P +PW ELG+DIVIE TG+F Sbjct: 3 IRVGINGFGRIGRNYFRALL-EQGADIEIVAVNDLGDTATTAHLLKYDTILGRLKAEVSHTE-DTITVDGKTIKVLSERNPADIPWGELGVDIVIESTGIF 101
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23 Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 3 Query: 369 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVF 671 +KV INGFGRIGR+F R GR++ +++V +ND K+ +HLLKYDS+ G FK V+ D ++I VDGK IKV + +DP Q+PW +LG+D+VIE TGVF Sbjct: 3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKD-DSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVF 100
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 369 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVF 671 +K+AINGFGRIGRN + R +D+V +ND K +HLLKYDS G + V+ D I VDG+ IK+++ RDP LPWA+LGID+VIE TGVF Sbjct: 1 MKLAINGFGRIGRNVFKIAFERG---IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDG-AIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVF 97
BLAST of FC875581 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 372 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVF 671 +VAINGFGRIGR R + RK+ ++VV +ND K +HLLKYDS+ F V+ +N I VDGK IKV + DP +LPW +LG+D VIE TGVF Sbjct: 3 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLI-VDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVF 101 The following BLAST results are available for this feature:
BLAST of FC875581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875581 ID=FC875581; Name=FC875581; organism=Citrus clementina; type=EST; length=674bpback to top |