FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_POLNA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas naphthalenivorans (strain CJ2) GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.741e-39 Identity = 91/234 (38.89%), Postives = 136/234 (58.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQG E++ +G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K E+V+ +AG++LG L T QTGP+G+ V ++Y+ + + E Y +++ DR T I S+GG IE++A P I+ ID G+ +E A K+ +G+ A++ +KLYK + ++D +L+EINPL S L+A DAK NFD NA FR Sbjct: 1 MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKTIEDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEFIDPLTGLGEEQAVKIANGIGLPPESTAQAVDIFQKLYKCYMDTDASLVEINPLNRDSKNALMALDAKFNFDPNALFR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MYXXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.741e-39 Identity = 93/239 (38.91%), Postives = 137/239 (57.32%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 + IHEYQG E+ KYG+ PKG+ S ++ + A +++ +VVK+QI AGGRG G GGV + K E ++LA +MLG L T QTGP+G+ V KVY+ E L++ E+Y + LDR T+ + +GG IE++AEK+P I++ +D G D K+ GL N + LY++F ++D +L+EINPL +VA DAK+ FD+NA +R K L Sbjct: 1 MKIHEYQGKEIFRKYGVPTPKGILAVSANDAEAAAKEL--GTSVVVVKAQIHAGGRGKG-------GGVKLAKSPAEAKELAKQMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGLGLTGPTVNKFTQFCSALYRMFMDTDASLVEINPLVILKDGGVVALDAKVTFDENALYRHKDLL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MESSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.741e-39 Identity = 97/239 (40.59%), Postives = 137/239 (57.32%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQ EL+ YG V +G+A+ + E + A + + VVKSQI AGGRG G FK KGGV + K EEV A +MLG LVTKQTGP+GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ L A D LYK F E D +LLE+NPL +L DAK++FD+NA FR + Sbjct: 1 MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLDGAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFRHE 237
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp. (strain WCH70) GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.741e-39 Identity = 91/239 (38.08%), Postives = 140/239 (58.58%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQ E++ YG++VP G +V+E +A +++ VVK+QI AGGRG GGV + K +EV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ A ++ + N A++ + LY++F + DC++ EINPL T +++A DAKLNFD NA +R K L Sbjct: 1 MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKEL--GSPVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIPKELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAES (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 97/243 (39.92%), Postives = 136/243 (55.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK V ++Y+ E + E Y ++DR T ++ +GGT IE++A + P I K ID G++ A ++ + A + + LY +F E DC+++EINPL T Q++A DAKLNFDDNA FR K L Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 97/243 (39.92%), Postives = 136/243 (55.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK V ++Y+ E + E Y ++DR T ++ +GGT IE++A + P I K ID G++ A ++ + A + + LY +F E DC+++EINPL T Q++A DAKLNFDDNA FR K L Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_POLSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=sucC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 90/241 (37.34%), Postives = 140/241 (58.09%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG E++ +G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K ++V+ +AG++LG L T QTGP+G+ V ++Y+ + + E Y + + DR++ I S+GG IE++A P I+KV +D G+TD A +V G+ ++ ++KLYK + E+D +L+EINPL S +++A DAK NFD NA FR + + Sbjct: 1 MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGIGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_GEOKA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus kaustophilus GN=sucC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 91/234 (38.89%), Postives = 138/234 (58.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ YG++VP G +VDE +A +++ VVK+QI AGGRG GGV + K EEV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ A ++ + N A++ + LY++F + DC++ EINPL T +++A DAKLNFD NA +R Sbjct: 1 MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKEL--GAPVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIPKHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLP8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobaculum parvum (strain NCIB 8327) GN=sucC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 90/236 (38.14%), Postives = 141/236 (59.75%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQG ++ ++G+ VPKG+ S +E K+A ++F + +VVK+QI AGGRG GGV + K EEV ++A KMLG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ ++ G+ A + L + + ++ + LYK + D +L EINPL T +++A DAK+NFDDNA +R Sbjct: 1 MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAAELFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEVYEIAQKMLGTTLVTHQTGPEGKEVRRLLIEEGMNIDKEFYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPKYGLQGFQAREAALFLGMQGEQFRNGVKFIDALYKAYTTIDASLAEINPLVVTKEGRVLALDAKINFDDNAMYR 229
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAHJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sucC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.382e-39 Identity = 92/236 (38.98%), Postives = 135/236 (57.20%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G + +E + +++ D + VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK V ++Y+ + + E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T +++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKEL--DTEIYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHK 227 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |