FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB2_MOUSE (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Suclg2 PE=2 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 3.262e-51 Identity = 107/238 (44.96%), Postives = 152/238 (63.87%), Query Frame = 2 Query: 23 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 R LN+ EYQ +LM+++G+ V + + E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V +LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+I+G +GG IE++A P +I K ID+F GI D A ++ + L + +N A +Q+ KLY LF + D T +E+NP ET Q+V DAK+NFDDNA FRQK Sbjct: 37 RWLNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.268e-51 Identity = 105/234 (44.87%), Postives = 149/234 (63.68%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ +L ++G+ PKG+A ++ E + +++ + VVK+Q+ AGGRG GTFK+G KGGVH+VK EEVE++AGKML Q+LVTKQTG GK+VSK+ + E + L E YFAI+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L A + + +YKLF DC+L+EINPL T+ ++ A DAK NFDDNA +R Sbjct: 1 MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNM--GLSQYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKFNFDDNALYR 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB2_PIG (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.240e-50 Identity = 107/238 (44.96%), Postives = 149/238 (62.61%), Query Frame = 2 Query: 23 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K EV LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +E+NP ET Q+V DAK+NFDDNA FRQK Sbjct: 37 RWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB2_BOVIN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLG2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.607e-50 Identity = 106/238 (44.54%), Postives = 148/238 (62.18%), Query Frame = 2 Query: 23 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V LA +M+G L TKQT +G V KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +E+NP ET Q+V DAK+NFDDNA FRQK Sbjct: 36 RWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB2_HUMAN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.371e-49 Identity = 105/238 (44.12%), Postives = 148/238 (62.18%), Query Frame = 2 Query: 23 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K V LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+F GI D A ++ + L ++ A +Q+ KLY LF + D T +E+NP ET Q+V DAK+NFDDNA FRQK Sbjct: 36 RWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB_NEOFR (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 5.208e-49 Identity = 105/246 (42.68%), Postives = 156/246 (63.41%), Query Frame = 2 Query: 8 QQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDE---DAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 Q Q R L++HEY L+ +Y +N PKG+ + +E +A + + + ++LV+K+Q+LAGGRG G F SGL+GGV + E+V+D A KMLG L+TKQTG G+ + VY+ E+ E YFAI+LDR T GP+++ S+GG IE++A+ P+ I+ VP + G+T E D AK + G K + A + KLYK+F E D T++EINP+AE + ++V DAK FDDNA+++ K Sbjct: 21 QTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKL--NTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKM-GFTEKCVPQ--AADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKPK 261
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC1620.08 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.759e-48 Identity = 100/238 (42.02%), Postives = 151/238 (63.45%), Query Frame = 2 Query: 17 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVH-IVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 Q R L +HEY +++ K+G++VP+G S +E +K +D+ +LVVK+Q+LAGGRG G F SGL+GGV + E A +M+G L+T+QTGP GKI + VY+CE+ + E YFAI++DR+ P+I+ +GG IE +A + P+ I+K + + A ++VD L + + A++ + KLYK+F + D T +EINPLAET+ +++ DAKLNFDDNA FR Sbjct: 19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDL--KVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFR 254
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MAGSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.858e-47 Identity = 103/238 (43.28%), Postives = 146/238 (61.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG +++AKYG+ V KG + DE + +D+ VVKSQI AGGRG G FK+ KGGV + K EEV+ +MLGQ+L+TKQTGP GK V +VY+ + + E+Y ++++DR T I+ ++GG IE++A +P I+KV ID G ++ GL + N ++ V LYK F + DC+++EINPL T +L+A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDL--GGPVWVVKSQIHAGGRGAGRFKNDPNGKGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLGLEGKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHK 236
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCB_YEAST (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=LSC2 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.852e-46 Identity = 99/245 (40.41%), Postives = 156/245 (63.67%), Query Frame = 2 Query: 14 QQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETS---GKQLVAADAKLNFDDNAAFRQKR 736 Q R L+IHEY+ A+L+ +YGI P+G + +E +A + + + +LV+K+Q L GGRG G F +G K GVH+++ ++ ED+A +ML L+TKQTG GK VS VY+ +++ +E Y +I++DR+T P+II S+GG +IE++AE+ P+ I K I+ G++ + A V L +++A + V LYK+F E D T +EINPL+E +++ DAK FDDNA+FRQ++ Sbjct: 26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKL--NTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEK 268
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_OPITP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.494e-45 Identity = 101/234 (43.16%), Postives = 138/234 (58.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L K+G+ VPKG + +E A + +VVKSQI AGGRG GTF G KGGV + K K E + AGKMLG LVT QTGP G+ V +Y + E Y AI+LDR T+ P+I+ ++GG IE +A P+ I KV +D G+ D ++V L A+ +A + ++ LY+ F E+D +++E+NPL T Q+ A DAK+ FDDNA FR Sbjct: 1 MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQL--PEGMIVVKSQIHAGGRGKGTFTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFTAAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQVEALDAKVAFDDNALFR 232 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |