FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SYNFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 97/238 (40.76%), Postives = 137/238 (57.56%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQ +L KYG+ +P+G A +V+E K ++ FP +VVK+QI AGGRG G GGV + K EV+ A +LG LVT QTGP+G++V K+ + E L + E+Y +++ DR T+ + + GG IE++A K P I+KV ID G A ++ GL K V LYKL + DC+L+EINPL TS +++A D K+NFDDNA +R K Sbjct: 1 MKIHEYQAKQLFQKYGVPIPRGKAAFTVEEAKAVGAELGTFP----VVVKAQIHAGGRGKG-------GGVKLAKSAAEVDQYAKGILGMTLVTHQTGPEGRLVKKLLVEEGLPIEKELYLSVLPDRGTSKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPLLGFKGFHANELAYGLNLKPELIKQFNAMVAALYKLCTDYDCSLVEINPLVLTSDNRVIALDGKINFDDNAMYRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain MW2) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKITKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain N315) GN=sucC PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sucC PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Newman) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain COL) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STAA9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain JH9) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39 Identity = 95/240 (39.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKG----LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP+G A +V++ K+ DV+ VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK + ++Y+ E ++ E Y ++DR T ++ +GGT IE++A K P I K ID G++ A ++ + N A + + LY +F E DC+++EINPL T+ ++A DAK+NFDDNA FR K Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVY------VVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |