FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AZOSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azoarcus sp. (strain BH72) GN=sucC PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.818e-41 Identity = 97/241 (40.25%), Postives = 137/241 (56.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQ E++ KYG+ P+G+ SVDE KA +++ K VVK+QI AGGRG G GGV + K +EV LAG++LG LVT QTGP+G+ V ++ + E + E Y A + DR T ++ S+GG IE++A P I+KV +D G+TD A ++ G+ A A++ KKLY + E+D +L EINPL + A DAK NFD NA FR + + Sbjct: 1 MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEEL--GGKIWVVKAQIHAGGRGKG-------GGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYVAALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGIGVPEASIPQAVDTFKKLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HERAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herminiimonas arsenicoxydans GN=sucC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41 Identity = 100/238 (42.02%), Postives = 138/238 (57.98%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQG E++ KYG+ PKG SVDE +A + + K VVK+QI AGGRG G GGV + K +EV A +LG LVT QTGP+G++V ++ + E + E+Y +++DR + ++ S+GG IE +AE P I KV ID F G+ D +A D +A K+ +I Q + LYK F E+D +L EINPL T ++VA DAK NFD NA +R Sbjct: 1 MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKL--GGKVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEA----DDIARKIGVPEGSIPQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BURXL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia xenovorans (strain LB400) GN=sucC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41 Identity = 92/241 (38.17%), Postives = 144/241 (59.75%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG E++ K+G+ VP+G V SVD+ KA +++ VVK+QI AGGRG G GGV + K E+V + A ++LG LVT QTGP+G+ V+++ + E + E+Y +++DR + +++ S+GG +E++AEK P +I K+ +D G+ D +A ++ + A A ++ LYK F E+D +L EINPL T +++A DAK NFD NA FR + + Sbjct: 1 MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYVGLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVPAASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41 Identity = 96/237 (40.51%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ +YG + G+AV S+++ +K + + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + +GG IE +AE+ P I+ +P+D G+T D ++ D L R D + LYK FCE D +LLEINPL L DAK++FD+NA FR Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELHDNARKDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKISFDNNALFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACICJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=sucC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41 Identity = 96/236 (40.68%), Postives = 139/236 (58.90%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ EL+ YG+ V G + +E +A + + VVKSQI AGGRG G FK KGGV + K EEV A MLG LVTKQTGP G++V +VY+ + E+Y ++++DR + +I+ ++GG IE++AEK+P I++V +D +GI+ A ++ GL + V +YK F DC ++EINPL T ++VA DAK++FDDNA +R Sbjct: 1 MNIHEYQAKELLKSYGVAVLDGHVAWTGEEAAEAARKL--PGPVYVVKSQIHAGGRGAGHFKDDPEGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVVRRVYVEAGCDIKRELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGLGLDATQMKAFAKFVNAMYKAFVALDCAIVEINPLVVTGAGEVVALDAKVSFDDNALYR 234
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BURS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia sp. (strain 383) GN=sucC PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40 Identity = 98/245 (40.00%), Postives = 147/245 (60.00%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG E++ K+G+ VP+G SVDE K +++ VVK+QI AGGRG G GGV + K E+V + A ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR T +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL +S +++A DAK NFD NA FR + + Sbjct: 1 MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYVSLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVIALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PELLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon luteolum (strain DSM 273) GN=sucC PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.519e-40 Identity = 90/241 (37.34%), Postives = 142/241 (58.92%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFP--DHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG +++ K+G+ VPKG+ S +E K+A + +F D +V+K+QI AGGRG GGV + K EE ++A +MLG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P +++K+ +D G+ A + L + +A+ + LY + D L EINPL T +++A DAK+NFD NA +R K ++ Sbjct: 1 MNIHEYQGKDILRKFGVAVPKGIVAYSAEEAKQAAEQLFAEQDSPVVVIKAQIHAGGRGKA-------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQGFQAREAAFFLGLEGEQFRNAVSFITALYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRHKDFI 234
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NAUPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=sucC PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.519e-40 Identity = 91/234 (38.89%), Postives = 139/234 (59.40%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E+ KYG+ P+G + E ++ +++ VVK+QI AGGRG GGV + K +EVE +A +MLG LVT QTGP+GK+V KVY+ E + +E+Y ++LDR P+++ ++GG IE++AEK P I+KV ID G A K+ GL ++ + I+ LY ++ ++D ++EINPL +T + +A DAK+ FDDNA ++ Sbjct: 1 MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEEL--GGNLWVVKAQIHAGGRGKA-------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYLGMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGLGLPKDEQREFIKFASALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PROVI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=sucC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.984e-40 Identity = 91/241 (37.76%), Postives = 142/241 (58.92%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG +++ K+G+ VPKG+ S +E K+A + +F + +VVK+QI AGGRG GGV + K EE ++A +M+G LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P+ ++K+ +D G+ A + L + A+ + LYK + D L EINPL T +++A DAK+NFD NA +R K +L Sbjct: 1 MNIHEYQGKDILRKFGVAVPKGIVAHSPEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAYEIASQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSQNVLMISTEGGMEIEKVAEETPDRLLKIQVDPLFGLQGFQAREAAFFLGLEGEQFRSAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRHKDFL 234
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=sucC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.984e-40 Identity = 96/237 (40.51%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDH-KELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQ +++AKYG+ VP+G +++E + +F + K +VVK+QI AGGRG G GGV + K EE E A ++LG LVT QTGPQG+ V ++ + E ++ E+Y I+LDR A + + GG IE++A K P+ I K ID G A ++ L K NDA++ + LYK + ++D +LLEINP T +L A D K+NFDDNA FR K Sbjct: 1 MKIHEYQAKDILAKYGVAVPRGEVANTLEEAMDVAKRLFAEGAKGVVVKAQIHAGGRGKG-------GGVKVAKTLEEAEQYAKQILGMQLVTHQTGPQGQKVQRLLIEETAAIDRELYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPAVGFQAYQARQLAFALGLKPTQINDAVKFMMGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFRHK 230 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |