FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAUSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter sp. (strain K31) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 91/237 (38.40%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHE+Q ++A++G VP+G +V+E A + + VVKSQI AGGRG G FK KGGV +VK E+V+ A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR+T+ ++ ++GG IED+A P I ID G+ A + L +A + +LY F D +LEINPL T L DAKL+FD NA +R Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGYPAFTVEEAVAAAEKL--GGPVFVVKSQIHAGGRGKGKFKGLGPDAKGGVRVVKSVEDVKTNAAEMLGRVLVTHQTGPKGKQVNRLYVEEGAAIAKEFYLSLLVDRETSMVSVVASTEGGMDIEDVAHATPEKIHSFSIDPATGVWPTHARALAKALGLTGGLAKEAATLLGQLYTAFLAKDMAMLEINPLIVTEDDHLKVLDAKLSFDGNALYR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_WOLTR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=sucC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.573e-37 Identity = 92/236 (38.98%), Postives = 133/236 (56.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV--VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ K+ + VPKG S +E + + D LVVK+QI AGGRG GGV + K EE + MLG LVT QTGP G+ V +VY+ E S+ E Y +I++D K + P I S+GG IE++A+ +P IVK+ ID D+ K+ + L+P+ ++ + K +Y F +D +EINPL ET+ +A DAK++FDDNA +R Sbjct: 1 MNIHEYQAKEILHKFNVPVPKGFVAMSAEEAETKINQLKSD--VLVVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKGMLGITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKLSNIFNLSPEQIEKITNV--AKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PHEZH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Phenylobacterium zucineum (strain HLK1) GN=sucC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.573e-37 Identity = 90/237 (37.97%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHE+Q ++A++G+ VP+G SVDE +A + + VVKSQI AGGRG G F+ KGGV +VK +EV+ A +MLG++LVT QTG GK V+++Y+ E + E Y ++++DR+T+ ++ ++GG IE++A P IV ID G+ + L +A + +LY F D ++LEINPL T L DAK++FD NA FR Sbjct: 1 MNIHEHQAKAVLAEFGVAVPRGYPAFSVDEAVQAAEKL--GGPVFVVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQVNRLYIEEGAQIAKEFYLSLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPATGVFPHHGRHLAKALGLTGGLAKEAATLLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HYPNA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=sucC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.573e-37 Identity = 96/237 (40.51%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTF---KSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ +G V +G+ V S+ +V+KA D P VVKSQI AGGRG G F ++G KGGV + KE+V+ A MLG LVT QT GK V+++Y+ + + E+Y +I++DR T+ + ++GG IE +A P I+ V ID G+T DAAK+ L + D ++ LYK F E D +LE+NPL L DAK++FD NA FR Sbjct: 1 MNIHEYQAKALLKSFGAPVAEGVPVLSLADVQKAI-DTLPGPL-WVVKSQIHAGGRGKGKFIEKEAGEKGGVRLAFNKEDVKKHAEAMLGNHLVTAQTSAAGKQVNRLYIEDGADIEKELYLSILVDRATSNVAFVVSTEGGMDIEAVAHDTPEKILTVQIDPMAGVTPADAAKINSALNLSGSAAEDGLKLYPILYKAFVEKDMAMLEVNPLIVMKDGHLRVLDAKVSFDGNALFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AZOSE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azoarcus sp. (strain EbN1) GN=sucC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.573e-37 Identity = 93/241 (38.59%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQ EL+ KYG+ P+G SVD KA +++ K VVK+QI AGGRG G GGV + + +EV A +LG LVT QTGP+G+ V + + E + E Y A + DR T I+ S+GG IE++A P I+K +D G+TD A + G+ A A++ +K+LY + E+D +L EINPL + A DAK NFD NA +R + F Sbjct: 1 MKIHEYQAKELLRKYGVVTPRGFHTVSVDGAVKAAEEL--GGKIWVVKAQIHAGGRGKG-------GGVKLARSLDEVRQHASDILGMQLVTHQTGPEGQKVRNLLIEEGADIQKEYYVAALTDRATQKVAIMASSEGGMDIEEVAHSTPEKILKEFVDPLVGLTDAQAENLARGIGVPEASVAKAVDALKRLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALYRHPEIVDF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia africae (strain ESF-5) GN=sucC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37 Identity = 91/234 (38.89%), Postives = 129/234 (55.13%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE +AEK P+ I+K +D G+ D + L K E VK +Y F E+D +EINPL S L+A DAK+ FDDN FR Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BRAJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium japonicum GN=sucC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37 Identity = 94/242 (38.84%), Postives = 133/242 (54.96%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQ L+ ++G+ + KG+ V + + A + + VVKSQI AGGRG G FK +G KGGV I K EV + A +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR+T+ + ++GG +IED+A P IV +D GI V + L A + +LY F D ++LEINPL T QL DAK++FDDNA FR L Sbjct: 1 MNIHEYQAKALLGEFGVPISKGVPVLKAADAEAAAKAL--PGPVYVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQVNRLYIEDGSDIDKEFYLSLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPATGIMGHHGRTVANALKLSGDLAKQAEKLTAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVL 240
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICPR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia prowazekii GN=sucC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + K V+K+QI AGGRG GGV + K KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE +AEK P I+K +D G+ D + L K E VK +Y F E+D T +EINPL S L+A DAK+ FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTKVYVIKAQIHAGGRGKA-------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKAVYNAFIETDATQIEINPLIINSYGNLLALDAKITFDDNGLFK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RHOFD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=sucC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37 Identity = 87/241 (36.10%), Postives = 138/241 (57.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG E++ + G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + + +EV+ LAG++LG LVT QTGP+G+ V ++ + + + E Y + + DR + +I S+GG SIED+A P I+ +D G+T A K+ + + A++ ++K+YK++ ++D +L+EINP+ + A DAK NFDDNA FR + + Sbjct: 1 MKIHEYQGKEILRQAGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKLARSIDEVKKLAGEILGMQLVTHQTGPEGQKVRRLLIEDGADIQKEYYVSAVTDRASQRVAMIVSSEGGMSIEDVAHDTPEKIITEIVDPATGLTVAQATKLANAIGVPAGSTAQAVDVLQKVYKVYMDTDASLVEINPMILEGNGNIKAIDAKFNFDDNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_WOLPP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=sucC PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36 Identity = 90/234 (38.46%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ K+ + VPKG S + V+ + D VVK+QI AGGRG GGV + K EE + MLG LVT QTGP G+ V ++Y+ E S+ E Y ++++D K + + I S+GG IE++A+ P IVK ID G T+ D +K+ + K +Y F +D + +EINPL ET+ VA DAK+NFDDNA +R Sbjct: 1 MNIHEYQAKEILHKFNVPVPKGFVATSAEGVETQINQLKSD--VFVVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKNMLGITLVTHQTGPSGQQVRRIYIEEGSSIKKEYYLSLVVDPKLSRLVFIFSSEGGMDIEEVAKNSPTKIVKFDIDPATGFTNLDNSKLANNFNLNSEQIERITNIAKNIYDAFITTDASQIEINPLVETNSGDFVALDAKINFDDNALYR 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |