FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICRS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D +EINPL S L+A DAK+ FDDN R Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLLR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICRO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D +EINPL S L+A DAK+ FDDN R Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLLR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICPU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia peacockii (strain Rustic) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D +EINPL S L+A DAK+ FDDN R Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTQTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGHLLALDAKITFDDNGLLR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia bellii (strain RML369-C) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ G+ V + + A ++ + K VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+++ DR + I ++GG IE++AEK P I+K +D G+ + A + L K E VK YK F E+D +EINPL L+A DAK FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDEL--NTKVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFKDHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_DESPS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfotalea psychrophila GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 95/236 (40.25%), Postives = 131/236 (55.51%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQ +L KY I VP+GL ++ EVK A + + + VK+QI AGGRG G GGV + K EV A +LG LVT QTGP G+ VSK+ L E +S+ E+Y +I++DR+ A II C GG +IE++A P I K+ I+ G + + L + LYKLF + DC+++EINPL T QL+A DAK++ D NA FRQ+ Sbjct: 1 MKIHEYQAKQLFRKYSIPVPEGLLCTNLQEVKTALKSL---QLPIAVKAQIHAGGRGKG-------GGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILLEEGVSIARELYLSILVDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHINQAREWLNIAQEQARAFSLFIHALYKLFLDYDCSMVEINPLIITEDNQLIALDAKVDTDSNALFRQR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHE+Q ++A++G VP+G A + DE A + + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LEINPL T+ L DAKL+FD N+ FR Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHE+Q ++A++G VP+G A + DE A + + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LEINPL T+ L DAKL+FD N+ FR Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: MTKA_RHILO (Probable malate--CoA ligase subunit beta OS=Rhizobium loti GN=mtkA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 85/235 (36.17%), Postives = 138/235 (58.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHI-VKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 ++IHEYQ EL+A++G++VP+G S ++ +++ + V+K+Q+ +G RG GG+ + EE+ A MLG+ LVT+QTGP+GK++S++YL E + + E+Y +LDRK +I+ + GG IED+ EK PN I++ +D G+ A ++ GL A E + Y++F + D ++LEINPL T L+A DAK++FD+NA FR+ Sbjct: 1 MDIHEYQAKELLARHGVHVPRGGLAYSPEQATYRAREI--GGGKWVLKAQVHSGARGKA-------GGIKLCANDEEISSAAEAMLGRKLVTQQTGPRGKLISRLYLEEAVDIAQELYVGFVLDRKEERVMIVASAAGGMEIEDIVEKEPNSILRTSVDPGVGMQRFQAREIAFGLGLDHNLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGNLIALDAKMSFDENALFRR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VEREI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Verminephrobacter eiseniae (strain EF01-2) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36 Identity = 93/244 (38.11%), Postives = 139/244 (56.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL---APKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG +++ ++G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K +EV LAG MLG L T QTGP+G+ V ++Y+ E + E Y +I+ DR T I S+GG IE++ P MI+ +D G+ E A K+ G+ AP A + A++ +++LY+ + ++D +LLEINPL +L A DAK NFD NA +R + + Sbjct: 1 MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVQLAKTIDEVRRLAGSMLGMQLKTHQTGPEGQKVRRLYIEEGADIGKEYYLSIVTDRATQKLAFIASSEGGMDIEEVKRAKPEMIITEFVDPLAGLGPEQALKIAVGIGLPAPAQA-QAQAVDIMRRLYQCYMDTDASLLEINPLNCDGQNRLTALDAKFNFDANALWRHPEIVAY 234
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICCK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia canadensis (strain McKiel) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36 Identity = 91/234 (38.89%), Postives = 129/234 (55.13%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYGI GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V ++Y+ ++ E YF+I+ DR + I + GG IE++A+K P IVK +D G+ D + L K E VK +Y F E+D T +EINPL + L+A DAK+ FD+NA F+ Sbjct: 1 MNIHEYQAKEILRKYGIPTSTGLVVTKTEQINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKIAHDMFGINLVTHQTGPQGQKVKRLYIESGCDILKEYYFSIVFDRSASCITFIASTAGGVDIEEVAKKTPEKIVKFSVDPATGLQDFHMRGIAYELGFKDNQVKQMKEIVKSVYNAFIETDATQIEINPLIVKTDGDLLALDAKITFDENALFK 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |