FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICFE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia felis GN=sucC PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36 Identity = 90/234 (38.46%), Postives = 129/234 (55.13%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P IVK +D G+ D + L K E VK +Y F E+D +EINPL + L+A DAK+ FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRLASCITFIASTEGGVDIEEVAEKTPEKIVKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_OLICO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=sucC PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36 Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ ++ ++G++V KG+ + + + A + + VVKSQI AGGRG G FK +G KGGV + K +EV+ +MLG+ LVT QTGP GK V+++YL E + E Y + ++DR+T+ + ++GG IE +A P IV +D GI KV L K A + V +LY F D ++LEINPL + +L DAK++FD NA +R Sbjct: 1 MNIHEYQAKAVLREFGVSVSKGVPILKASDAEAAAKQL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFVDQMLGKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLKGDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIYR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=sucC PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36 Identity = 96/234 (41.03%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ + A GI KG SVDE +++ VK+QI AGGRGLG GGV I K +EV+D A K+LG LVT QTGP+GK+V K+Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DAK +FDD+A +R Sbjct: 1 MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKEL--GGSVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICB8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia bellii (strain OSU 85-389) GN=sucC PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.964e-36 Identity = 90/234 (38.46%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ G+ V + + A + + K VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+++ DR + I ++GG IE++AEK P I+K +D G+ + A + L K E VK YK F E+D +EINPL L+A DAK FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDKL--NTKVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFKDHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALRD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinibacter ruber (strain DSM 13855) GN=sucC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36 Identity = 88/236 (37.29%), Postives = 132/236 (55.93%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEYQ L YG++VP G+ +VD A + + ++ +VK+QI AGGRG G GGV + EEV + A +LG LVT QTGP+G+ V K+ + E + + E Y + LDR+T+ I+ ++GG IE +AE+ P I +V +D G+ ++ + + A+ ++ LY+ F E+DCTL EINPL +T G + A DAK+N DDNA FR Sbjct: 1 MKLHEYQAKGLFRDYGVSVPDGIVAETVDAAVDAARRLEEENDATLFIVKAQIHAGGRGKG-------GGVKLAHSVEEVREHADNILGMDLVTHQTGPEGQTVRKILVTEGVDIDQEYYLGVTLDRETSMNAIMVSTEGGVDIETVAEESPEKIQRVWVDPSIGLRPFQTRQLAFAMGLEGDAFKQAVASIQGLYEAFEENDCTLAEINPLVQTPGGDIEAVDAKVNLDDNALFR 229
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJ8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=sucC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36 Identity = 95/234 (40.60%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ + A GI KG SVDE +++ VK+QI AGGRGLG GGV I K +EV+D A K+LG L T QTGP+GK+V K+Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DAK +FDD+A +R Sbjct: 1 MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVSNAKEL--GGSVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLATHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni (strain RM1221) GN=sucC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36 Identity = 95/234 (40.60%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ + GI KG SVDE +++ VK+QI AGGRGLG GGV I K +EV+D A K+LG LVT QTGP+GK+V K+Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DAK +FDD+A +R Sbjct: 1 MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKEL--GGSVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sucC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36 Identity = 95/234 (40.60%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ + A I KG SVDE +++ VK+QI AGGRGLG GGV I K +EV+D A K+LG LVT QTGP+GK+V K+Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DAK +FDD+A +R Sbjct: 1 MNIHEYQAKAIFADNSIPTLKGKVAFSVDEAVANAKEL--GGSVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLDKDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni GN=sucC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36 Identity = 95/234 (40.60%), Postives = 127/234 (54.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ + GI KG SVDE +++ VK+QI AGGRGLG GGV I K +EV+D A K+LG LVT QTGP+GK+V K+Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DAK +FDD+A +R Sbjct: 1 MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKEL--GGSVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BREBN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=sucC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36 Identity = 84/234 (35.90%), Postives = 133/234 (56.84%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQG E++ +YG+ VP+G +V+E +A +++ VVK+QI AGGRG GGV + K +EV A ++LG++LVT QTGP+GK V ++ + + + E Y +++DR T +++ +GG IE++A P I K +D G+ A ++ + N A + + LY+ F + D ++ EINPL T +++A DAKLNFD NA +R Sbjct: 1 MNIHEYQGKEILKQYGVKVPEGRVAFTVEEAVEAAKELGTQVN--VVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYASEILGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYVGVVVDRATGSVVMMASEEGGMDIEEVAANNPEKIFKEVVDPVTGLNGFQARRLAYAINIPKELINKAAKFMMSLYQAFVDKDASIAEINPLVVTGDGEVMALDAKLNFDSNALYR 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |