FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RHIL3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=sucC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35 Identity = 93/237 (39.24%), Postives = 126/237 (53.16%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ YG V +G+A+ V+E + A + + VVKSQI AGGRG G FK KGGV + K +EV A +MLG LVT QTG GK V+++Y+ + + E+Y ++++DR + ++GG IE +A P I + ID G+T D A + + A DA LYK F E D LLEINPL L DAK++FD NA FR Sbjct: 1 MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSL--PGPLYVVKSQIHAGGRGKGKFKELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYCSLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKAFELEGAAAEDAKTLFPMLYKAFGEKDMALLEINPLIVMKDGHLRVLDAKMSFDGNALFR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LEPIN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira interrogans GN=sucC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35 Identity = 85/236 (36.02%), Postives = 130/236 (55.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDH--KELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E++ ++ NVP G+ + + KA +V +VVK+QI AGGRG G GGV + K KE+ K+LG L+T QTGP+GK V KVYL + + + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID G+ A ++ L + +Y+ + + D +LLEINPL T +++A D K++ D+NA +R Sbjct: 1 MKIHEYQAKEILRRHKANVPFGVVIDKKENASKAHDEVTSKTGGSVVVVKAQIHAGGRGKG-------GGVKVTKTKEDAIAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAKEYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFELGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYR 229
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LEPIC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=sucC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35 Identity = 85/236 (36.02%), Postives = 130/236 (55.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDH--KELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E++ ++ NVP G+ + + KA +V +VVK+QI AGGRG G GGV + K KE+ K+LG L+T QTGP+GK V KVYL + + + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID G+ A ++ L + +Y+ + + D +LLEINPL T +++A D K++ D+NA +R Sbjct: 1 MKIHEYQAKEILRRHKANVPFGVVIDKKENASKAHDEVTSKTGGSVVVVKAQIHAGGRGKG-------GGVKVTKTKEDAIAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAKEYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFELGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYR 229
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RHOP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=sucC PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.245e-34 Identity = 91/237 (38.40%), Postives = 126/237 (53.16%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ ++ ++G+ V G + E + A + VVKSQI AGGRG G FK +G KGGV + K +EV+ A +ML LVT QTGP GK V+++Y+ E + E Y ++++DR T+ + ++GG SIED+A P IV +D GI V + L K A V KLY F D +LEINPL T L DAK++FD N+ +R Sbjct: 1 MNIHEYQAKAVLREFGVPVSHGYPIFKASEAEAAATKL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKTYAEQMLHATLVTVQTGPAGKQVNRLYIEEGSEIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMSHHGRAVANALGLKGDQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNSLYR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SOLUE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Solibacter usitatus (strain Ellin6076) GN=sucC PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.627e-34 Identity = 87/236 (36.86%), Postives = 133/236 (56.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQ ++A+Y + VP+G + + + A + + +VVK+QI AGGRG G GGV + K E +LA K+LG LVT QTGP+G++V ++ + E L + E+Y I+LDR P+ + S GG IE++A K P +I+K ++ + G++ A K+ G+ A N A + L K + D +L EINP T+ ++ A DAK+ FDDNA +R K Sbjct: 1 MKIHEYQAKAILAQYKVPVPRGHVAYTEADAETAAKTL---GGSVVVKAQIHAGGRGKG-------GGVKVAKDAAEALELAKKILGMTLVTHQTGPEGRLVQRLLIEETLPIERELYLGIVLDRVQGKPVFMASSAGGMDIEEVAAKTPELILKETLE-YPGLSPYQARKLAFGIGIPAASVNAAAAAMTALSKAYWAMDASLAEINPFILTTDGKVYALDAKITFDDNALYRHK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AGRT5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=sucC PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.627e-34 Identity = 91/239 (38.08%), Postives = 126/239 (52.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQ L+ YG V +G+A+ V+E + A + + VVKSQI AGGRG G FK KGGV + K EEV + MLG LVT QTG GK V+++Y+ + + E+Y ++++DR + ++GG IE +A P I + I+ G++D D A + L DA LYK F E D LLE+NPL L DAK++FD NA FR + Sbjct: 1 MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQL--PGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYCSLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGVSDADVAAISKALELDGVAAEDAKALFPILYKAFNEKDMALLEVNPLIVMENGHLRVLDAKMSFDGNALFRHE 237
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_METFK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=sucC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.124e-34 Identity = 87/237 (36.71%), Postives = 136/237 (57.38%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK-LYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HEYQ L+ +YG+NVP+ + +A + + D VVK+Q+ AGGRG GGV +V+ +EV+D+A +LG+ LVT Q P G+ V KV + L + E+Y ++++DR +++ + GG IE++A+ P I++ D NG+ D A + L V D+ A ++ K LY+LF E+D LLEINPL T+ LVA D K++ DDNA +R++ Sbjct: 1 MNLHEYQAKALLQRYGVNVPRSQVAETAQAAVEAARALEGD--AWVVKAQVHAGGRGKA-------GGVKLVRTLDEVQDIAVSLLGKRLVTYQNAPDGQPVEKVLVEATLPIARELYVSMLVDRSLERVVLVASAAGGMEIEEIAKDSPEKILQEVCDPLNGLVDYQARNIAFALG-LVGDQVAAFTRLAKGLYRLFKENDLALLEINPLIVTAEGALVALDCKMSVDDNALYRRR 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: MTKA_METEA (Malate--CoA ligase subunit beta OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=mtkA PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.124e-34 Identity = 84/236 (35.59%), Postives = 131/236 (55.51%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +++HEYQ EL+A +G+ VPKG S D+ A ++ VK+QI AG RG GG+ + + EV D A +LG+ LVT QTGP+GK V +VY+ E+Y +LDRK +I +GG IE++A K P +++V ++ G+ A ++ L + + A++ + Y+ F + D T+LEINPL T +++A DAK++FDDNA FR++ Sbjct: 1 MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSF--WAVKAQIHAGARGKA-------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYLGYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLNIKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRR 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_WOLSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolinella succinogenes GN=sucC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 87/234 (37.18%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+A+YG+ +P+G + E Q + + +K+QI AGGRG GGV + K EE ++A MLG L+T QT +GK V KVY+ E L + E Y I+LDR P+I+ +GG IE++A+ PN I+KV +D G K+ L ++ L++L+ + D ++EINPL TS K+ VA DAK++FD+NA +R Sbjct: 1 MNIHEYQAKALLAQYGVGIPRGGVAETPAEATVIAQRL--GGEIWAIKAQIHAGGRGKA-------GGVKLAKTPEEAGEIAKAMLGSRLITHQTSLEGKEVHKVYVEEGLGIEREYYLGIVLDRSLEMPVIMASRQGGVDIEEVAKNSPNEIIKVAVDPMIGFRPFHGRKLAFALGLAKEQVGLFVDFCTSLFRLYVQKDAEIVEINPLVFTSCKRFVALDAKISFDNNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PELPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelobacter propionicus (strain DSM 2379) GN=sucC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 82/238 (34.45%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 + IHEYQ +++A +GI +P+G + +V++A +++ V+K+Q+ AGGRG G GG+ + + + ++A ++LG LVT QTGP+G V ++ + E + + E+Y +I LDR+++ +I ++GG IE++A P+ I + ID F G+ A + GL + +E + LY+ E DC+L+EINPL T+ LVA D K+ FDDNA R Y Sbjct: 1 MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAAREL---GGHCVIKAQVYAGGRGKG-------GGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLVEEVVDIERELYLSITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLGLVGPLCEECVELILNLYRCLLERDCSLVEINPLVVTNAGWLVAMDTKMTFDDNALQRHCEY 228 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |