FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ORITI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Orientia tsutsugamushi (strain Ikeda) GN=sucC PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34 Identity = 85/237 (35.86%), Postives = 135/237 (56.96%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +NIHEYQ E+++KY + + G+A+ +++ A + D V+K+QI AGGR +G GG+ I K E ++LA M G LVT QTGP+G+ V ++Y+ + E+Y ++DR + S+GG +IE++A P+ I+KV I++ GI + K++ GL +A + I + +Y + +D T +EINPL T +L+A DAK+NFDD+A FRQ Sbjct: 1 MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATD--TFVIKAQIHAGGRKIG-------GGIKISNDKNEAKNLAKNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYLGAVIDRSNHCITFMASSEGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLTGDLAKQMAKI--MSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BRASB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=sucC PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34 Identity = 88/237 (37.13%), Postives = 129/237 (54.43%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ ++G+ + KG+ V ++ A + + VVKSQI AGGRG G FK +G KGGV + K +EV A +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR+T+ + ++GG +IED+A P I+ +D G+ V L A + +LY F D +LEINPL T QL DAK++FD NA F+ Sbjct: 1 MNIHEYQAKALLHEFGVPISKGVPVLRPEDSDAAAKAL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIEDVAHSTPEKIITFSVDPATGVMPHHGRAVAKALKLSGDLAKQAEKLTIQLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNALFK 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICAH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia akari (strain Hartford) GN=sucC PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.733e-34 Identity = 87/234 (37.18%), Postives = 126/234 (53.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QT PQG+ V+ +Y+ ++ E YF+I+ DR + I ++GG IE++A K P I+K +D G+ D + L K E VK +Y F E+D +EINPL + L+A DAK+ FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTEPQGQKVNCLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAAKTPAKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFK 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LARHH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Laribacter hongkongensis (strain HLHK9) GN=sucC PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.733e-34 Identity = 87/235 (37.02%), Postives = 129/235 (54.89%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+AKYG+ V +G+ ++ DE A + K VVK+Q+ AGGRG GGV +VK +EE D+A ++G+ LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE++A P I+KV +D G+ A +V L K N+ ++ + Y+ F E+D L EINPLA + L DAK+ D NA +R Sbjct: 1 MNLHEYQAKELLAKYGLPVQQGILASNADEAAAAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREEAADVAATLIGKNLVTYQTDANGQPVNSVLVCEDMYPVERELYLGAVVDRSTRRVTFMASTEGGVEIEEVAHNTPEKILKVTVDPLVGLLPFQAREVAFALGLKDKQVNEFVKLMTGAYRAFVENDFALFEINPLAVRANGALACVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ORITB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Orientia tsutsugamushi (strain Boryong) GN=sucC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.181e-34 Identity = 85/237 (35.86%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +NIHEYQ E+++KY + + G+A+ +++ A + D V+K+QI AGGR +G GG+ I K E ++LA M G LVT QTGP+G+ V ++Y+ + E+Y ++DR + S GG +IE++A P+ I+KV I++ GI + K++ GL +A + I + +Y + +D T +EINPL T +L+A DAK+NFDD+A FRQ Sbjct: 1 MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATD--TFVIKAQIHAGGRKIG-------GGIKISNDKNEAKNLAKNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYLGAVIDRSNHCITFMASSAGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLTGDLAKQMAKI--MSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_EHRRG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ehrlichia ruminantium (strain Gardel) GN=sucC PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.073e-34 Identity = 89/239 (37.24%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQ +++ ++GI+VP+G+ V S++EV A + + K +VVK+QI AGGRG GGV + + +E + MLG LVT QT G+ V KVYL E + E Y + +++RK II ++GG IE++A P +V ID G + V KK+YK E+D + +EINPL ETS +A DAK+NFDDNA +R L Sbjct: 1 MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKI--NSKVIVVKAQIHAGGRGKA-------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYISAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLSVDQTRKITSIAKKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FLAPJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=sucC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 82/245 (33.47%), Postives = 139/245 (56.73%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-----SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 +NIHEYQG E++A YG+ + +G+ + E A + + + VVK+Q+ AGGRG G GGV + K ++VE+++ +++G L+T QT +GK V KV + E + S +E Y +++L+R T +I+ ++GG IE++A P++I ID G+ A ++ L + ++ + LY + SD ++ EINP+ +TS +++A DAK+N DDNA +RQ +Y Sbjct: 1 MNIHEYQGKEILASYGVRIQRGIVANNPVEAVAAAKQLTTETGTSWYVVKAQVHAGGRGKG-------GGVKLAKNLQQVEEISEQIIGMQLITPQTSAEGKKVHKVLIAEDVYYPGESETSEFYISVLLNRSTGRNMIVYSTEGGMDIEEVAAHTPHLIHNEEIDPSVGLQAFQARRIAFNLGLSGNAFKEMVKFIDSLYNAYIGSDASMFEINPVLKTSDDKIMAVDAKVNIDDNALYRQPKY 238
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_EHRRW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ehrlichia ruminantium (strain Welgevonden) GN=sucC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33 Identity = 88/239 (36.82%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQ +++ ++GI+VP+G+ V S++EV A + + K +VVK+QI AGGRG GGV + + +E + MLG LVT QT G+ V KVYL E + E Y + +++RK II ++GG IE++A P +V ID G + V +K+YK E+D + +EINPL ETS +A DAK+NFDDNA +R L Sbjct: 1 MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKI--NSKVIVVKAQIHAGGRGKA-------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYISAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLSVDQTRKITSIAEKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RHOBA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopirellula baltica GN=sucC PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 88/237 (37.13%), Postives = 128/237 (54.01%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTF--KSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQG +L G+ V G V + DE A + K VVK+QI AGGRG G KG V + EE + A +LG+ LVT QTGP+G+ VSKV++ + E+Y I++DR + P+++ ++GG IE +AE+ P +I K D G+ K+ L + A A + + + + F + DC + EINPL T ++VA DAK+ FD+NA FR K Sbjct: 1 MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKL--GGKIAVVKAQIHAGGRGKGNVIDNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYLGIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIEGAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHK 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HYDS0 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=sucC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 94/240 (39.17%), Postives = 136/240 (56.67%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV--VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + +HE+Q EL+ KYG+ VP+G A +V E K+A Q + +P LVVK+QI G RG GGV IVK EE+E + +LG+IL T Q P GK+VS++ + + + E Y +I LDR + +I+ +GG IE+L+++ P+ I+K +D GI K+ GL P + + V KLY+ + + D +LLEINPL T +V DAK+ DDNAAFR K Sbjct: 1 MKLHEHQSKELLKKYGLPVPEGYAAFNVKEAKEAAQALGGYP----LVVKAQIHCGARGKA-------GGVKIVKSDEELEAFSEAILGKILKTVQC-PNGKVVSRLLIEKATPIEKEFYLSITLDRSNSKILIMASKEGGMEIEELSKEKPDAIIKEYVDPVLGIMPYQTRKLSFALGLNPSLFGKI-----VSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRHK 223 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |