FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_THISH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31 Identity = 80/236 (33.90%), Postives = 129/236 (54.66%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HE+Q L ++GI VP+G+AV+ + +A + D VVK+Q+ AGGRG GGV +VK E+E G++LG L T QTGP G ++ V + + E+Y ++++DR I+ + GG IE +A + P I+ + +D G +V L + + ++ + +LY+LF +SD +L+EINPL T +L+A DAK+N DDN +R + Sbjct: 1 MNLHEFQAKALFREHGIPVPEGVAVSDPAALGEAISSLGGD--AWVVKAQVHAGGRGKA-------GGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYLSLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLEGPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRHQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAARAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain LVS) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ALISL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aliivibrio salmonicida (strain LFI1238) GN=sucC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31 Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT +G+ V+KV + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEYGLPVPEGYACDTAQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDAKGQPVTKVLVEEASNIANELYLGAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQAFQGRE----LAFKLGLEGDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LEGPL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella pneumophila (strain Lens) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A YG+ VP+G +V++ + VVK+Q+ AGGRG GGV +V K+E+ +A MLG LVT QT +G+ V+ + + E + E+Y ++DR T +I+ ++GG IE +A + P I KV +D G+ + A K+ ++D I+Q L K+F + D +LLEINPL T QL+ D K+N D NA FRQ + Sbjct: 1 MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQL--STSRWVVKAQVHAGGRGKA-------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRET----AFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LEGPC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella pneumophila (strain Corby) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A YG+ VP+G +V++ + VVK+Q+ AGGRG GGV +V K+E+ +A MLG LVT QT +G+ V+ + + E + E+Y ++DR T +I+ ++GG IE +A + P I KV +D G+ + A K+ ++D I+Q L K+F + D +LLEINPL T QL+ D K+N D NA FRQ + Sbjct: 1 MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQL--STSRWVVKAQVHAGGRGKA-------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRET----AFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 80/240 (33.33%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K V+K+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVIKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |