FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBHB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.146e-30 Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + + K VVK Q+ AGGRG GGV + K+ V++ A K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRITTEKK--VVKCQVHAGGRGKA-------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PYRCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.146e-30 Identity = 78/236 (33.05%), Postives = 128/236 (54.24%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEY+ EL AKYG+ +P G + +EV+KA +++ P +V+K+Q++ GRG GG+ + K+ EE +L+ +M G + +G V K+Y+ + L + EMY ++++DR T + + GG IE++A+ P I +V +D F G+ D +V G +P A A V+ +YK+ + D L+E NPLA T +V DA++ DDNA FR Sbjct: 1 MKLHEYEAKELFAKYGVKIPPGRLALTPEEVRKAAEEMGPP---VVLKAQVVVAGRGKA-------GGIKVAKRVEEAYELSKQMFGMNI-------KGLTVRKLYVTKYLEVEREMYLSLIIDRATRRFLFLASPVGGMDIEEIAKTTPEKIKRVYVDPFVGLRDYHVRSIVSWLGFSPGTAQWQQAASIVQAMYKIAVDYDAELVESNPLALTKEGDVVPLDARVIVDDNALFR 219
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria meningitidis serogroup A GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.146e-30 Identity = 83/235 (35.32%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +EE +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ ++ + YK F E+D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIMB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria meningitidis serogroup B GN=sucC PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.415e-30 Identity = 83/235 (35.32%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +EE +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ ++ + YK F E+D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAMD5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=sucC PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.415e-30 Identity = 85/235 (36.17%), Postives = 122/235 (51.91%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ EL A+ G+ VPKG S E +KAT ++ D V K Q+ AGGRG GGV + ++V A + LG+ LVT QT QG+ V + + + E+Y ++DR ++ + + ++GG IE +AEK P++I KV ID G ++ L + + L KLF E D LLEINPL T ++L+ DAKL D NA +RQ Sbjct: 1 MNLHEYQAKELFARRGLPVPKGYVCRSAGEAEKATTELGGDL--WVAKCQVHAGGRGKS-------GGVKLCNNPQDVSAFAEQWLGKNLVTYQTDLQGQPVHHILVEAATDIAQELYLGAVIDRSSSRVVFMASTEGGVEIEKVAEKTPHLIHKVTIDPLTGPQPFQGRELAFQLGLTGKKVSQFSQIFMNLAKLFLECDLALLEINPLVITKKEELICLDAKLTVDGNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa GN=sucC PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30 Identity = 86/241 (35.68%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + +E +A + E VVK+Q+ AGGRG GGV +VK KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain LESB58) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30 Identity = 86/241 (35.68%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + +E +A + E VVK+Q+ AGGRG GGV +VK KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PARUW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Protochlamydia amoebophila (strain UWE25) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30 Identity = 73/236 (30.93%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HE+Q +++ KYGI VP +S EV++ + + ++K Q+ AGGRG GGV + +E+ + + +++G+ ++ +QTGP G I +V + + + E Y I ++R+ A ++I GG +IE +A + PN ++ +PI + ++ + K + + ++ L K F E+D +LLEINPL ET L+A DAKL+ DDNA F+ + Sbjct: 1 MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQY--QLQSAIIKVQVHAGGRGKA-------GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYLGITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPLEETFRSYHLIRIASFMGWKGKQIQEGVAIIQSLVKAFKETDASLLEINPLVETKEGHLLALDAKLSIDDNALFKHE 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACTPJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=sucC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30 Identity = 86/240 (35.83%), Postives = 126/240 (52.50%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ ++ A+Y + V KG+ S+D+ A + D K Q+ AGGRG GGV +V+ E E+ + + LGQ LVT QT G++V+ +YL E + E+Y ++DR + + + + GG +IED+A + P +I K ID G A+ G LA K+ D I+Q L+ KLF E D LLE+NPL T QL+ DAK+ D NA +R Sbjct: 1 MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGD--TWAAKCQVHAGGRGKA-------GGVKLVRSEAEIREFCHQWLGQRLVTFQTDKNGQLVNTIYLEETCLIERELYLGAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTG------AQAFQGRELAFKLGLSGDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain W619) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + ++ +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |