FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + ++ +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKI--GGNEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEP1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + ++ +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKI--GGNEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEE4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas entomophila (strain L48) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + ++ +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ ++Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PELCD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 84/238 (35.29%), Postives = 124/238 (52.10%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 + +HEYQ +L +YGI +P+G SV+E +A + VVK+QI AGGRG K+G G + ++ ++A ++L LVT QTG QG V + + E + + EMY ++ LDR +I GG IE A K P + ++ ID G+ A + L A + + LY+ E D +L+EINPLA T +L+A DAK++ DD+A FRQK L Sbjct: 1 MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAG---RCVVKAQIHAGGRG----KAG--GVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLVEEIVPVAREMYLSLTLDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGLRAFHARDIARFLGLDGPLSAAASKVILSLYRCLLEKDASLVEINPLAVTEEGRLMAMDAKVSIDDSALFRQKEML 229
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIMF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 83/235 (35.32%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +EE +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ ++ + YK F E+D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBSL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio splendidus (strain LGP32) GN=sucC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29 Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRE----LAFKLGLVGDQIKQFVKIFMGLGQMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio parahaemolyticus GN=sucC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29 Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain PA7) GN=sucC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29 Identity = 86/241 (35.68%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + +E +A + E VVK+Q+ AGGRG GGV +VK KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKI--GGGEWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIM0 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria meningitidis serogroup C (strain 053442) GN=sucC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29 Identity = 82/235 (34.89%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +EE +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ ++ + YK F ++D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLAGYGLPVQGGILARNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACTP7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=sucC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29 Identity = 86/240 (35.83%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ ++ A+Y + V KG+ S+D+ A + D K Q+ AGGRG GGV +V+ E E+ + + LGQ LVT QT G+ V+ +YL E + E+Y ++DR + + + + GG +IED+A + P +I K ID G A+ G LA K+ D I+Q L+ KLF E D LLE+NPL T QL+ DAK+ D NA +R Sbjct: 1 MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGD--TWAAKCQVHAGGRGKA-------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYLGAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTG------AQAFQGRELAFKLGLSGDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYR 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |