FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACTP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=sucC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29 Identity = 86/240 (35.83%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ ++ A+Y + V KG+ S+D+ A + D K Q+ AGGRG GGV +V+ E E+ + + LGQ LVT QT G+ V+ +YL E + E+Y ++DR + + + + GG +IED+A + P +I K ID G A+ G LA K+ D I+Q L+ KLF E D LLE+NPL T QL+ DAK+ D NA +R Sbjct: 1 MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGD--TWAAKCQVHAGGRGKA-------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYLGAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTG------AQAFQGRELAFKLGLSGDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L A+YGI VP G +S DE A + + + +VK+QI AGGRG GGV K +EV+ A MLG + T Q+ V+ V + E + E+Y ++++DR T I S+GG IE +A + P I + +D G+ + L + N + + LY+LF + D +L+E+NPLA S L A D K+N DDNA FR K Sbjct: 1 MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSL--GNGPWMVKAQIHAGGRGKA-------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLSVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEAKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa (strain M12) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L A+YGI VP G +S DE A + + + +VK+QI AGGRG GGV K +EV+ A MLG + T Q+ V+ V + E + E+Y ++++DR T I S+GG IE +A + P I + +D G+ + L + N + + LY+LF + D +L+E+NPLA S L A D K+N DDNA FR K Sbjct: 1 MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSL--GNGPWMVKAQIHAGGRGKA-------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLSVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEAKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L A+YGI VP G +S DE A + + + +VK+QI AGGRG GGV K +EV+ A MLG + T Q+ V+ V + E + E+Y ++++DR T I S+GG IE +A + P I + +D G+ + L + N + + LY+LF + D +L+E+NPLA S L A D K+N DDNA FR K Sbjct: 1 MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSL--GNGPWMVKAQIHAGGRGKA-------GGVKFCKTTDEVKQAAAAMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLSVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEAKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XYLF2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa (strain M23) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L A+YGI VP G +S DE A + + + +VK+QI AGGRG GGV K +EV+ A MLG + T Q+ V+ V + E + E+Y ++++DR T I S+GG IE +A + P I + +D G+ + L + N + + LY+LF + D +L+E+NPLA S L A D K+N DDNA FR K Sbjct: 1 MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSL--GNGPWMVKAQIHAGGRGKA-------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLSVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEAKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RUTMC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ruthia magnifica subsp. Calyptogena magnifica GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 78/236 (33.05%), Postives = 126/236 (53.39%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 ++IHEYQ L I +PKG+ + + ++ + + D VVK+QI AGGRG G GGV E+VE + ++LG L+T QT +G V ++ + K ++ E+Y ++++DR+T ++ +KGG IE +A K P+ I+K ID ++ +D + L + LY++F + D L+EINPL T +L+A D K++FDDNA +R K Sbjct: 1 MHIHEYQAKTLFRCRDIQIPKGILIDNTTKINDVCKALGGD--VWVVKAQIHAGGRGKG-------GGVIFCHSIEKVERVCNQLLGSKLITPQTDAKGLPVGQLLIEAKQNIERELYLSLLIDRQTHKITVLSSTKGGMDIEKVASKTPDKIIKFGIDPLGSLSVQDCTFLAKKLGFNTELTKQFNNTLLSLYEIFTQKDVNLIEINPLIITQENKLLALDGKIDFDDNALYRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SODGM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sodalis glossinidius (strain morsitans) GN=sucC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29 Identity = 83/239 (34.73%), Postives = 126/239 (52.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A ++ E +++ + VVK Q+ AGGRG GGV +VK KEE+ A + LG+ LVT QT G+ V+++ + + E+Y +++DR T + + ++GG IE +AE+ P++I KV +D G + LA K+ + Q K++ LF E D L+EINPL T L+ D KL+ D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPTGYACNTLREAEESASKIGAG--PWVVKCQVHAGGRGKS-------GGVKVVKLKEEIRAFAEQWLGKRLVTYQTDALGQPVNQILVEVATDIAKELYLGVVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRE----LAFKLGLSGKQVSQFSKIFMGLATLFLERDLALVEINPLVITGAGDLICLDGKLSADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEPG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain GB-1) GN=sucC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29 Identity = 84/245 (34.29%), Postives = 128/245 (52.24%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + + +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ + Q K++ KLF E D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEAAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAAQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKIIKATIDPLVGAQPFQGRE----LAFQLGLEGKQVAQFAKIFVGLAKLFKEHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ENT38 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Enterobacter sp. (strain 638) GN=sucC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29 Identity = 84/239 (35.15%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV ID G + LA K+ ++Q K++ K+F E D L+EINPL T+ L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACNTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLAKIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIG2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria gonorrhoeae (strain NCCP11945) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 82/235 (34.89%), Postives = 122/235 (51.91%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +E+ +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ + + YK F E+D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |