FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NEIG1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 82/235 (34.89%), Postives = 122/235 (51.91%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+A YG+ V G+ + +E A + K VVK+Q+ AGGRG GGV +VK +E+ +++A ++G LVT QT G+ V+ V +CE + V E+Y ++DR T + ++GG IE +A + P I KV +D G+ A +V L K N+ + + YK F E+D L E+NPLA L D K+ D NA +R Sbjct: 1 MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_METJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanocaldococcus jannaschii GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 83/233 (35.62%), Postives = 125/233 (53.65%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEY+ + KYGI VP+ V+ D++ D KE+V+K+Q+L GGRG K+G G + KEE A ++ + + +G+ V K+ + EKL + E Y +I++DR P+II ++GG IE++AEK P I+K IDV A +V + + + KLYK+F E D T++EINPL T + AADA L+ DD+AAFR Sbjct: 1 MKLHEYEAKNIFKKYGIPVPESFLVSKEDDLNSINVD-----KEVVLKAQVLVGGRG----KAG--GILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKEAKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittGG) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 84/236 (35.59%), Postives = 117/236 (49.58%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HEYQ +L YG+ V G SVDEV + D + K Q+ AGGRG GGV +V+ EE A K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG IE++A+ P+++ KV ID G ++ L A + L +LF E D +L+E+NPL T LV DAK+ DDNA FR K Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGD--KWAAKCQVHAGGRGKA-------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLSDAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCV (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila caviae GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 78/238 (32.77%), Postives = 129/238 (54.20%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAG--KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +++HEYQ +L+ Y I +P +SV+E ++A +++ D VVK Q+ AGGRG K G +V K + LA K+L V+ QT + V KV + +++ E Y A+++DRK P I+ GG IE++A+KYP+ ++ VP+ F + + +++ + + R + +KKL + F ++D +LLEINPL T L+ DAK+ DDNA +R + Sbjct: 1 MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAG--VVKVQVHAGGRG--------KNGGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVNIAAEYYLAVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQIIKFMNWEGDIRKQGAQLIKKLVQCFYDNDASLLEINPLVLTQEGDLLVLDAKITIDDNALYRHPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_THIDA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thiobacillus denitrificans (strain ATCC 25259) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 75/236 (31.78%), Postives = 124/236 (52.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HEYQ +++ +N P+G+A S D A +++ + VVK+QI AGGRG GGV +V + V +A +LG+ LVT Q P G+ V V + E L + E+Y ++++DR + ++ + GG IE +A P ++ D G+ D + L D + +LY++F +D +LLEINPL T+ +++ D K++ DDNA +R+K Sbjct: 1 MNLHEYQAKQVLRSSNLNTPRGIAATSADAAADAAREL--GGEAWVVKAQIHAGGRGKA-------GGVKVVTSIDAVRSVAAALLGKPLVTVQNAPDGQPVHTVLVEETLPIARELYLSLLVDRASERVAVVASAAGGMDIEQVAHATPEKVLTEICDPLLGVQDFQCRALAFALGLGGDAYKDFCRLLPQLYRVFVANDLSLLEINPLVVTTDNRVLPLDCKMSVDDNALYRRK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_THICR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thiomicrospira crunogena (strain XCL-2) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 81/235 (34.47%), Postives = 122/235 (51.91%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L +YGI VPKG+ + + ++ A + D K VVK+QI AG RG GGV +V+ EE E A ++LG L T QT + ++ + + + L + E Y ++M+DR T + + GG IE +AE P I+ V +D G+ ++ L ++ Y+L + D +LLEINPL T+ +LVA DAK+N D NA +RQ Sbjct: 1 MNLHEYQAKSLFQQYGIPVPKGVMINDLADLDAALGQI--DSKGWVVKAQIHAGARGKA-------GGVKLVETAEEAEQAASELLGSSLATIQTAGKALPINALLIEQTLDIYQEFYLSLMVDRVTKTHTFVISAAGGMDIELVAEASPEKILSVHVDPTVGLMPYQCREIAFALGLTGTAFKQMASVMQGFYQLALDKDVSLLEINPLVLTAENELVALDAKVNIDSNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittEE) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 84/236 (35.59%), Postives = 116/236 (49.15%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HEYQ +L YG+ V G SVDEV + D + K Q+ AGGRG GGV +V+ EE A K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG IE++A+ P+++ KV ID G ++ L + L +LF E D +LLE+NPL T LV DAK+ DDNA FR K Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGD--KWAAKCQVHAGGRGKA-------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COLP3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 82/241 (34.02%), Postives = 124/241 (51.45%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQ +L A+YG+ V +G A + E +A + D VVK+Q+ AGGRG GGV +VK KEE+++ A LG+ LVT QT G+ V+K+ + + NE+Y ++DR + + + ++GG IE +AE+ P +I + ID G A ++ L ++ L K+F + D LLEINPL T L D K+ D NA +RQ + F Sbjct: 1 MNLHEYQAKQLFAEYGLPVSEGFACDTPQEAAEAADKIGGDM--WVVKTQVHAGGRGKA-------GGVKLVKSKEEIKEFAQHWLGKNLVTYQTDANGQPVAKILVESCTDIANELYLGAVVDRASQRVVFMASTEGGVDIEKIAEETPELIHQAEIDPLVGAQPYQARELGFKLGLNPTQMKQFVKIFMGLAKMFEDCDFALLEINPLVITDEGNLHCLDGKIGIDGNAIYRQPKMRAF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEFS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain SBW25) GN=sucC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29 Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + + +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +AE+ P I+K ID G + LA ++ + Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKI--GGTEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKIAEETPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEF5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=sucC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29 Identity = 84/245 (34.29%), Postives = 128/245 (52.24%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +N+HEYQG +L A+YG+ V KG AV + +E +A + E VVK+Q+ AGGRG GGV +V+ KE+ + A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G + LA ++ + Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + F Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDTPEEAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRE----LAFQLGLEGKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTF 232 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |