FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_KLEP3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Klebsiella pneumoniae (strain 342) GN=sucC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I K+ ID G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRE----LAFKLGLEGKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae GN=sucC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 82/239 (34.31%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L YG+ V G SV++V + + K Q+ AGGRG GGV +V+ EE A K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I S+GG +IE++ + P+++ KV ID G ++ L + L +LF E D +LLE+NPL T LV DAK++ DDNA FR K L Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQL--SGGKWAAKCQVHAGGRGKA-------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTPQGNLVCLDAKISVDDNALFRHKDLL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AZOVD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sucC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 83/241 (34.44%), Postives = 126/241 (52.28%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V +G+A+ + + +A + D V K Q+ AGGRG GGV +VK +EE + A LG+ LVT QT G+ V K+ + + E+Y ++DR + + + ++GG +IE +A + P I+K ID G A LA ++ D ++Q ++ KLF E D L+E+NPL L+ DAK+N D NA FRQ R Sbjct: 1 MNLHEYQGKQLFAEYGLPVSRGVAIDTPEAAAEACDRIGGDC--WVAKVQVHAGGRGKA-------GGVKLVKSREEAKVFAVNWLGKRLVTYQTDASGQPVGKILVEACTEIERELYLGAVVDRSSRRIVFMASTEGGVNIEQVAHETPEKILKASIDPLVGAQPFQAR----DLAFRLGLEGDQLKQFTHIFIGLAKLFQEHDLALVEVNPLVVQKDGNLLCLDAKINLDTNALFRQPR 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEHT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 81/237 (34.18%), Postives = 122/237 (51.48%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ V G A + +E A + + D VVK+Q+ AGGRG GGV +VK +EV+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G A ++ L ++ L K+F + D LLEINPL T L D K+ D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEYGLPVSTGYACDTPEEAAAAAEKIGGDM--WVVKTQVHAGGRGKA-------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLNPVQMKQFVKIFMGLGKMFTDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ALTMD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 81/237 (34.18%), Postives = 120/237 (50.63%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L +YG+ V +G A + +A + +E VVK Q+ AGGRG GGV +VK K+++ A LG+ LVT QT G+ VSK+ + + NE+Y ++DR T + + ++GG IE +AE+ P I+K ID G A ++ L + L K+F E D L+EINPL + L DAK+ D NA +RQ + Sbjct: 1 MNLHEYQGKQLFKEYGLPVSEGYAADTAQGAVEAADRI--GGEEWVVKCQVHAGGRGKA-------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ALCBS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ +L A YG+ V G A + +EV +++ D + VVK+Q+ AGGRG GGV +V E+ A K LG+ LVT QT G+ VSK+ + + E+Y + +LDR + + + ++GG IE +AE+ P I+K ID G A ++ L + N + L KLF + D L+E+NPL T L DAK+N D +A +R Sbjct: 1 MNLHEYQSKQLFADYGLPVSTGFACDTPEEVAAKAKEIGGD--KWVVKAQVHAGGRGKA-------GGVKLVDTPEDAAAFAKKWLGKQLVTFQTDEHGQPVSKILVETCTDIAKELYLSAVLDRASRRVVFMASTEGGVDIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLEGKQVNQFAKIFVGLAKLFVDKDLALIEVNPLVITDTGDLHCLDAKINVDGSALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIF5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 79/234 (33.76%), Postives = 124/234 (52.99%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+A+ G+ VP+ + SV E +++ VVK+Q+ AGGRG GGV +V +VE A ++LG+ LVT QTGPQG+ V+ + + E + E+Y A+M+DR A + +GG IE+LA P + +V ++ G A ++ ++ +Y+L D ++EINPLA T+ +L+A DAK+ DDNA +R Sbjct: 1 MNLHEYQAKRLLAEEGVPVPRAIPAFSVREAVNQAREL--GGPAWVVKAQVHAGGRGKA-------GGVRMVDSIAQVEKAAQELLGKPLVTAQTGPQGQHVAALLIEEPSRIARELYLALMVDRGQARITFLATREGGVDIEELAASRPEALHRVVVEPSTGFLPFQARQLGFQFGLDAGQVQQLTRIMQGMYRLAQRLDALMVEINPLAITAEGRLLALDAKVVMDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIF2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 79/234 (33.76%), Postives = 124/234 (52.99%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+A+ G+ VP+ + SV E +++ VVK+Q+ AGGRG GGV +V +VE A ++LG+ LVT QTGPQG+ V+ + + E + E+Y A+M+DR A + +GG IE+LA P + +V ++ G A ++ ++ +Y+L D ++EINPLA T+ +L+A DAK+ DDNA +R Sbjct: 1 MNLHEYQAKRLLAEEGVPVPRAIPAFSVREAVNQAREL--GGPAWVVKAQVHAGGRGKA-------GGVRMVDSIAQVEKAAQELLGKPLVTAQTGPQGQHVAALLIEEPSRIARELYLALMVDRGQARITFLATREGGVDIEELAASRPEALHRVVVEPSTGFLPFQARQLGFQFGLDAGQVQQLTRIMQGMYRLAQRLDALMVEINPLAITAEGRLLALDAKVVMDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHISS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shigella sonnei (strain Ss046) GN=sucC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 80/239 (33.47%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHIFL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shigella flexneri GN=sucC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 80/239 (33.47%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |