FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MACCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Macrococcus caseolyticus (strain JCSC5402) GN=sucC PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.572e-37 Identity = 93/238 (39.08%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQG E+ G+ VP G + +E + + + KE VVK+QI AGGRG GGV I K +EVE A ++LG++LVT QTGP+GK V ++ + E + E Y +LDR T +++G +GGT IE++AE P I K ID G+ A ++ + N A++ + LY +F + D +++EINPL T +++A DAK+NFD NA FRQK Sbjct: 1 MNIHEYQGKEIFRSMGVAVPNGSVAYTPEEAVEVAKGL----KEGVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVESYAKELLGKVLVTHQTGPEGKEVKRLLVEEGCDIKKEYYLGFVLDRATDSVVLMGSEEGGTEIEEVAEATPEKIFKEVIDPVVGLMPYQARRLAFNINIPKESVNKAVKIMLGLYDVFMKKDASIIEINPLVTTGDGEVLALDAKINFDANALFRQK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia conorii GN=sucC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37 Identity = 92/234 (39.32%), Postives = 130/234 (55.56%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE +AEK P+ I+K +D G+ D + L K E VK +Y F E+D T +EINPL S L+A DAK+ FDDN FR Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGIDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RALSO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ralstonia solanacearum GN=sucC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37 Identity = 91/241 (37.76%), Postives = 138/241 (57.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +NIHEYQG E++ KY + VP+G+ SV+E KA + + VVK+QI AGGRG G GGV + K +EV+ A +LG LVT QTGP+GK V+++ + E + E+Y ++++DR + ++ S+GG IE++A P I + +D G+ D +A + + A A + ++ LYK F E+D +L EINPL T +++A DAK NFD NA FR + + Sbjct: 1 MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYVSLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQDAEADDIARKIGVPDASVPQARQALQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PERMH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=sucC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37 Identity = 95/236 (40.25%), Postives = 137/236 (58.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HE+Q E+ A+YG+ VPKG +V+E +A Q + FP +VVK+QI AGGRG GGV + +EV+ A ++LG+ LVT QTGP+G VS++Y+ E ++ E Y AI LDR + II+ S+GG IE++A K P I+ ID F G+ A ++ L N A KLY+L+ + D +++EINPL T +V DAK++FDDNA FR Sbjct: 1 MKVHEHQAKEIFARYGLPVPKGYPAFTVEEAVEAAQQLGKFP----VVVKAQIHAGGRGKA-------GGVKLANNLDEVQKYAAELLGKTLVTFQTGPEGLPVSRIYIEEGTNIDKEFYVAITLDRSKSKLIIMASSEGGMEIEEVAAKNPEAIITEVIDPFLGLRPYQAREIALKLGLPKNLLNKAAGLFVKLYELYMKEDASMVEINPLVLTKEGNIVILDAKVDFDDNALFR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NITHX (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=sucC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37 Identity = 93/237 (39.24%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ ++G+ V +G+ V E + A + + VVKSQI AGGRG G FK +G KGGV + K +EV+ A +MLG LVT QTGP GK V+++Y+ E + E Y + ++DR+T+ + ++GG +IED+A P IV +D G+ V L + A + V +LY F D LLEINPL T +L DAK++FDDNA +R Sbjct: 1 MNIHEYQAKALLREFGVPVSRGVPVLKASEAEAAAETL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQVNRLYIEEGSDIDKEFYLSALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPATGVMSHHGRTVAKALGLRGDLGKQAEKLVAQLYNAFIAKDMALLEINPLVVTRQGELRVLDAKVSFDDNALYR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RICM5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=sucC PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37 Identity = 91/234 (38.89%), Postives = 129/234 (55.13%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ KYG+ GL V +++ + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D T +EINPL S L+A DAK+ FDDN F+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINDTIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEIAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFQ 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RALEJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ralstonia eutropha (strain JMP134) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 91/241 (37.76%), Postives = 139/241 (57.68%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 +NIHEYQG E++ KY + VP+G+ SV E KA +++ VVK+QI AGGRG G GGV + K ++V+ A +LG LVT QTGP+GK V+++ + E + E+Y ++++DR + ++ S+GG IE++A P I + I+ G+TD DA + + A A + ++ LYK F ++D +L EINPL T +++A DAK NFD NA FR + + Sbjct: 1 MNIHEYQGKEILRKYNVPVPRGIPAFSVAEALKAAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSIDDVKTYATNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYVSLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVPDASVAQARQALQGLYKAFYDTDASLAEINPLILTGEGKVIALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PARL1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 94/237 (39.66%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDE-VKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQ ++AKYG+ VP G A + +E V KA + P VVK+QI AGGRG GGV +VK ++V+ A +++G LVT QTGP GK V+++Y+ + S+ E+Y +I++DR T+ I ++GG IE++A+K P I+ +D +GI+ KV L + + ++KLYK F D ++LEINPL T L+ DAK+NFD NA +R K Sbjct: 1 MNIHEYQAKAVLAKYGVPVPSGHAAFTPEEAVAKAKELGGP---VWVVKAQIHAGGRGKA-------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGPDGKEVNRLYIEDGSSISRELYLSILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFSVDPASGISGFHGRKVAYALGLEGDQVKQGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDAKVNFDSNALYRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NITWN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 92/237 (38.82%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ L+ ++G+ V +G+ V E + A + + VVKSQI AGGRG G FK +G KGGV + + +EV+ AG+MLG LVT QTGP GK V+++Y+ E + E YF+ ++DR+T+ + ++GG +IE++A K P IV +D G+ V L + A + V +LY F D +LEINPL T +L DAK++FD NA +R Sbjct: 1 MNIHEYQAKALLREFGVPVSRGVPVLQASEAEAAAETL--GGPVWVVKSQIHAGGRGKGKFKEASAGEKGGVRLARSIDEVKTFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYFSALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPATGVMSHHGRTVARALRLRGDLGKQAEKLVTQLYDAFIARDMAMLEINPLVVTKQGELRVLDAKISFDSNALYR 235
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_DELAS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 88/234 (37.61%), Postives = 134/234 (57.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQG +++ ++G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K ++V+ LAG++LG LVT QTGP+G+ V ++Y+ + + E Y + + DR T I S+GG IE++A P I+ + +D G+T ++ G+ I+ +KLYK + ++D +L+EINPL S +VA DAK NFD NA FR Sbjct: 1 MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSIDDVKALAGQILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYLSCVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIITIFVDPLVGLTQAQGEELAKGIGMPADSTAQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNVVALDAKFNFDANALFR 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |