FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sucC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + D VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L K+F + D LLEINPL T + D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDM--WVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HALHL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=sucC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 75/231 (32.47%), Postives = 121/231 (52.38%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNA 718 +N+HE+Q L + GI +P+G S E + A + + VVK+Q+ AGGRG GGV ++++ +E+E A +LG+ LVT QT +G+ + + + E L + E+Y ++DR + + + + GG IE++A P I V + G+ ++ L A D ++ LY+LF E D +L+EINPL T +L+A DAK+ DDNA Sbjct: 1 MNLHEFQAKHLFTEAGIAIPRGYVARSSAEARAAAERL--GGSAWVVKAQVHAGGRGKA-------GGVRVIQEGDEIERYADSLLGERLVTHQTDGRGQPIHALLVEEGLEIARELYLGALVDRASQRVVFMVSAAGGMDIEEVAASEPERIHTVRVHPAAGLQPYQCRQLGFALGLDKAQVGDLTRMMQGLYRLFLERDLSLVEINPLIVTGEGRLLALDAKVTVDDNA 222
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEHH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella halifaxensis (strain HAW-EB4) GN=sucC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27 Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + D VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L K+F + D LLEINPL T + D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDM--WVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PYRAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=sucC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.558e-27 Identity = 70/236 (29.66%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEY+ EL +KYG+ +P G + +EV+K +++ +V+K+Q++ GRG GG+ + K EE +LA KM G + +G +V K+Y+ + + + EMY ++++DR T + + GG IE++A+ P I +V +D G+ D +V G P+ A V+ +Y + + D L+E NPLA T ++ DA++ DDNA ++ Sbjct: 1 MKLHEYEAKELFSKYGVKIPPGRVATTPEEVRKIAEEI---GGPVVLKAQVVVAGRGKA-------GGIKVAKTPEEAYELATKMFGMNI-------KGLVVKKIYVTKYVEVEREMYLSLIIDRATRRYLFLASPIGGVDIEEIAKTQPEKIKRVYVDPSVGLRDYHVRSIVLWLGFKPETPQWRQASSIVQAMYNIMVDYDAELVESNPLAVTREGDVIPLDARVIVDDNALYK 219
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_IDILO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Idiomarina loihiensis GN=sucC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.558e-27 Identity = 81/241 (33.61%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L ++G+ V +G A + DE +A + + D VVK Q+ AGGRG GGV +VK ++V A + LG+ LVT QT +G+ V+K+ + + +E+Y ++DR + + + ++GG IE +AE+ P I+K ID G + L K+ D ++Q K++ K+F + D LLEINPL T + DAK+ D NA +RQ + Sbjct: 1 MNLHEYQGKQLFKEFGLPVSEGYACDTADEAVEAAKRIGGDI--WVVKCQVHAGGRGKA-------GGVKLVKSLDDVRAFAEQWLGKNLVTFQTDEKGQPVAKILVESCTDIADELYLGAVVDRASRKIVFMASTEGGVEIETVAEETPEKILKAEIDPTVGAQPYQGRE----LGFKLGLTPDQVKQFTKVFMGLAKMFEQYDLALLEINPLVITDEGNVHCLDAKVGIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAEI8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain 86-028NP) GN=sucC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.558e-27 Identity = 81/239 (33.89%), Postives = 118/239 (49.37%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L YG+ V G SV++V + D + K Q+ AGGRG GGV +V+ EE A K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG +IE++A+ +++ KV ID G ++ L + L +LF E D +L+E+NPL T LV DAK++ DDNA FR K L Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGD--KWAAKCQVHAGGRGKA-------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVMFIASPAGGMNIEEVAQNSLHLLHKVEIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTKQGYLVCLDAKISVDDNALFRHKDLL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERE8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sucC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 81/239 (33.89%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I KV +D G + LA K+ + Q K++ LF E D ++EINPL T LV D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDVHGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKVALDPLTGPQPYQGRE----LAFKLGLTGKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHESH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sediminis (strain HAW-EB3) GN=sucC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 80/237 (33.76%), Postives = 117/237 (49.37%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + D VVK Q+ AGGRG GGV + K+E+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L K+F + D LLEINPL T + D K+ D NA FRQ++ Sbjct: 1 MNLHEYQAKALFAEYGLPVSEGFACDTPQEAVEAAGRIGGDM--WVVKCQVHAGGRGKA-------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQEK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pseudotuberculosis GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |