FC875608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI E + ++S+ + S + +N+ + +I GP +PYEGG+F L + P +YP PK F T IYHPNI+ G IC++ILKDKW+PAL + VLLSI LL P P Sbjct: 11 QRIAMEYRAMISKESL-FSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNP 121
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 323 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 A + +R+ +E L+ GISA P DN+ + I G + YE +KL L P YP AP V+FLT YHPN+D G ICLDILK+KWS +RT+LLSIQ+LL P Sbjct: 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEP 142
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 2 Query: 332 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 ++ +R+ +E + LL PGI+A P DN+ + + GP + YE +KL L P +YP P V+F T +HPN+D+ G ICLDILK+ W+ + +RT+LLS+Q+LL P Sbjct: 30 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEP 142
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 2 Query: 272 SATTRRLKNKKKSILEMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 +A++ + ++S A ++ +R+ +E L+ GISA P DN+ + I G + YE +KL L P YP AP V+F+T +HPN+D G ICLDILKDKWS +RT+LLS+Q+LL P Sbjct: 10 AASSVASRKGQESGTSAARGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEP 142
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20 Identity = 48/123 (39.02%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 308 SILEMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 S +E + + R++ KE L + P G+ P+E ++ I GP +PYEGG FK++L L +++P PK FLTKI+HPN+ K G IC++ LK W L ++ +LL+I+ LL P P Sbjct: 5 SNVENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNP 127
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20 Identity = 58/145 (40.00%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 296 NKKKSILEMANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKV---------------RFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 NK + +M+N L R R KE GI E+N+ I GP +PY GG F++++ +PE YP PKV +F+T+I+HPNI + G ICLDILKDKW+ +L +RTVLLS+QA+L +P P Sbjct: 7 NKMQFSDKMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEP 151
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R+++KE Q + S P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 43/112 (38.39%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P+ PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 43/112 (38.39%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P+ PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 43/112 (38.39%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P+ PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128 The following BLAST results are available for this feature:
BLAST of FC875608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875608 ID=FC875608; Name=FC875608; organism=Citrus clementina; type=EST; length=707bpback to top |