FC875608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY GVF+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY GVF+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R+++KE Q + + P GI +E ++ I GP +PY GVF+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R+++KE Q + + P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 57/129 (44.19%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGIS-------ASPSEDNMRYFNV--MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSAPTP 676 + L R+ KE + LLS+P G S A+ S D + + I GP + Y G+F L++ +PE YP P V F T IYHPNID GRICLDIL K W P+L I TVL S++ LLS P P Sbjct: 5 ARLSLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNP 133
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY GVF+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMENTPPEGIKVLINESDVTDIQALIDGPAGTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 670 +R++KE Q+L+ + PGI A P SE+N+ ++ +I GP +PY GVF +L P++YP++ PK+ F I HPNI G +C+ IL +++WSP + +LLS+ ++LS P Sbjct: 7 KRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEP 130
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 R++++E Q + + P GI +E ++ +I GP +PY G+F+++L L +++P PK FLTKI+HPN+ G IC++ LK W P L I+ +LL+I+ LL P P Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNP 128 The following BLAST results are available for this feature:
BLAST of FC875608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875608 ID=FC875608; Name=FC875608; organism=Citrus clementina; type=EST; length=707bpback to top |