FC875608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ P P Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI KE L +P SA P D++ ++ I+GP+ SPY GGVF L + P +YP PKV F TKIYHPNI+ G ICLDILKD+WSPAL + VLLSI +LL+ P Sbjct: 5 KRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANP 116
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ P P Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 RR++++ +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL P P Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNP 118 The following BLAST results are available for this feature:
BLAST of FC875608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875608 ID=FC875608; Name=FC875608; organism=Citrus clementina; type=EST; length=707bpback to top |