FC875608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 46/110 (41.82%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ P Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDP 116
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL P P Sbjct: 7 KRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 65/136 (47.79%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 281 TRRLKNKKKSILEMANSNL----PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 T K K+ + NS L +RI KE + +P P SA P DN+ + ILGP S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I VLLSI +LL+ P Sbjct: 26 TNTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNP 161
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 50/112 (44.64%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +R++ + +RL +P GIS +P ++N+ ++N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + VL SIQ+LL P P Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL P P Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 46/110 (41.82%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P+V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ P Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDP 116
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 45/110 (40.91%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP 670 RR++++ +R+ +P G+SASP DN+ +N +I+GP+ +P+E G F+L L E+YP P+V+F+++++HPN+ G +CLDIL+++WSP + ++L S+Q+LL+ P Sbjct: 7 RRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDP 116
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 64/132 (48.48%), Postives = 77/132 (58.33%), Query Frame = 2 Query: 293 KNKKKSILEMANSNL----PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 K K+ + NS L +RI KE + +P P SA P DN+ + ILGP S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I VLLSI +LL+ P Sbjct: 30 KKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNP 161
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI KE L +P SA P D++ ++ I+GP S Y+GGVF L + P +YP PK+ F TKIYHPNI+ G ICLDIL+ +WSPAL + VLLSI +LL P P Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNP 115
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 341 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 +RI KE L +P SA P D++ ++ I+GP S Y+GGVF L + P +YP PK+ F TKIYHPNI+ G ICLDIL+ +WSPAL + VLLSI +LL P P Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNP 115 The following BLAST results are available for this feature:
BLAST of FC875608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875608 ID=FC875608; Name=FC875608; organism=Citrus clementina; type=EST; length=707bpback to top |