FC875612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/67 (55.22%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 449 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 +KS R+R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAK+ F Sbjct: 61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13 Identity = 34/60 (56.67%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 470 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+ F Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 33/60 (55.00%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 470 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+ F Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 2 Query: 419 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK+ F Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNF 240
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 2 Query: 404 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTFQM 655 R + V V A +T ++K +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT +RG A F + Sbjct: 98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSV 179
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 407 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 KS G + V T RK+ +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T ++G A F Sbjct: 76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNF 153
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 40/95 (42.11%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 383 PFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 PF FSAG + V ++T E R YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T +RG KA + F Sbjct: 67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNF 161
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 2 Query: 443 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTFQMK 658 + K + K YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T +RG KA + F ++ Sbjct: 143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLE 215
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 479 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T +RG A++ F Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNF 142
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 2 Query: 473 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTFQMK 658 K YRG+RQRPWGK+AAEIRDP KG RVWLGTF+T +RG KA V F ++ Sbjct: 142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204 The following BLAST results are available for this feature:
BLAST of FC875612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875612 ID=FC875612; Name=FC875612; organism=Citrus clementina; type=EST; length=722bpback to top |