FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38 Identity = 80/197 (40.61%), Postives = 126/197 (63.96%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKG-PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDD--AVHTAILTLKE 708 S+Y ++T FSP G L Q+E+A AV G T++GI+ +N VV+ EKK + L DE +V KI +L ++ + ++G+ D RV++ ++R + + + ++P+ V + R A + Q++TQS G RPFG+S L+ G+DD G P+LYQ DPSG+Y +WKA+A+G++ + FLEK Y E+ D A+ AI L E Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLE 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.985e-38 Identity = 80/192 (41.67%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKE 708 Y ++T FSP G+L Q+E+A AV G T+LGIK GVV+ +K++ S L++ S+ K+ + +IG +G+ D RVLV ++R +A+ Y Y EPI V LV+ + Q +TQ GGVRPFG +LL+AG D KG +L++ DPSG+ KA+A+G+ A E+ Y E+M L +A+ A+ L E Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYE 201
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.985e-38 Identity = 80/197 (40.61%), Postives = 127/197 (64.47%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKG-PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDD--AVHTAILTLKE 708 S+Y ++T FSP G L Q+E+A AV G T++GI+ +N VV+ EKK + L DE +V KI +L ++ + ++G+ D RV++ ++R + + + ++P+ V + R A + Q++TQS G RPFG+S L+ G+DD G P+LYQ DPSG+Y +WKA+A+G++ + FLEK Y E+ +D A+ AI L E Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLE 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.160e-37 Identity = 82/201 (40.80%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 115 KMGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 + G Y ++T FSP G+L Q+E+A AV G T+LG+K SNGV++ ++KK+ S L++++S+ KIQ + + V SG+ D RVL+ +R A+Q Y + + LV+ A MQ++TQ GGVRP+GVSL+ AG D GP+L+ DP+G+ +KA+A+G +FLEK Y E + +AV I LK E Sbjct: 2 QQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE 202
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.978e-37 Identity = 76/190 (40.00%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y +T FSP G+L Q+E+A AV G S+G++ +GVVIA ++ S L++ S+ KI + ++GV +G D R L+ +RRQ++ Y EP V L +E +Q++TQ+GG RPFGV+LLVAG +D P+L++ DPSG+ + W+A A+G + + +TFLE+ Y E M+L+ + A+ L Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRAL 198
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.583e-37 Identity = 81/201 (40.30%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 115 KMGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 + G Y ++T FSP G+L Q+E+A AV G T+LG+K +NGV++ ++KK+ S L++++S+ KIQ + + V SG+ D RVLV +R A+Q Y + + LV+ A MQ++TQ GGVRP+GVSL+ AG D GP+L+ DP+G+ +KA+A+G +FLE+ Y E + +AV I LK E Sbjct: 2 QQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLE 202
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.583e-37 Identity = 78/199 (39.20%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQIS 729 Y +T FSP G+L Q+E+A AV G S+G++ S+GVV+A +K++ S L++ SSV KI +IG+ +G D R L+ +RRQA+ Y EP+ V L +E +Q++TQ GG RPFGV+L++ G + P+L++ DPSG+ + WKA A+G + + + +LE+ Y E M+LD+ V A+ L + ++S Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVNDDELS 208 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |