FC875627

Overview
NameFC875627
Unique NameFC875627
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length743
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 56/188 (29.79%), Postives = 83/188 (44.15%), Query Frame = 1
Query:  157 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASG 720
            +AE I T   VF+G G  +  N +       P     I +  G  + V +    +ISG H NPAVT   A+  +        Y  AQ  GS++AS  L+++                           +F L++ +   A D +  ++G +A IA+G  +  N+  AGP SG SMNP RS GPA+  G
Sbjct:   46 IAEMIGTYFIVFSGCG-VVVVNVLYGGTITFPG----ICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMG 226          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATA-------ADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711
            AEF  T   VF G GSAI        AA  P    G + +A+  G   L +A A+G  ISGGH NPAV+ GL + G++     I YW+AQ+LG+I A+ +L V+  G    +                     GL+  +  TA             +    APIAIGF +    L + P +  S+NP RS G A+
Sbjct:    7 AEFFGTFWLVFGGCGSAIL-------AAAFPELGIGFLGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAGFAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL 193          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATA-------ADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711
            AEF  T   VF G GSAI        AA  P    G + +A+  G   L +A A+G  ISGGH NPAV+ GL + G++     I YW+AQ+LG+I A+ +L V+  G    +                     GL+  +  TA             +    APIAIGF +    L + P +  S+NP RS G A+
Sbjct:    7 AEFFGTFWLVFGGCGSAIL-------AAAFPELGIGFLGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAGFAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL 193          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 68/199 (34.17%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  148 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT---HNXXXXXXXXXXXXXXXXXTFGLVYTVYA-TAADPKKGSLGTI--APIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            +A  AEF++T L+VF GVGS + +       AL PS ++ IAI       +AV +    SG H NPAVT    +G  I++   + Y  AQL+G+ V + LL  V  G    T   +                  T  LV  V+A T +    GS  T+    +A+G ++G +      F+G SMNP RSFGPA+  G F
Sbjct:   25 RALFAEFLATGLYVFFGVGSVMRW-----PTAL-PS-VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATMIGISVALGHLIGIH------FTGCSMNPARSFGPAIIIGKF 210          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.044e-14
Identity = 67/203 (33.00%), Postives = 96/203 (47.29%), Query Frame = 1
Query:  148 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALF-VAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKV---------VTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            K Y AE I T    FAG GSA+    + A       GLV +++  G ++  +A AIG +ISG H+NPAVT GLA GG+      + Y IAQ+ G+IVA+ LL +         VT G A   ++                    +++      A   +   G  AP+AIG  +    L + P +  S+NP RS GPA+  G +
Sbjct:    4 KKYAAEAIGTFWLTFAGCGSAV----IAAGFPQVGIGLVGVSLAFGLSVVTMAYAIG-HISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQYSMMACFLTEVVMTMMFLFIIMGATHGRAPAG-FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGW 200          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFV---AVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA------------VPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            AE I T   V  G GSA+        AA  P G+  + +   F L V   A AIG +ISG H+NPAV+FGL +GG+      + Y IAQ++G+I+A+ ++ ++  G A               H+                    LV  + AT A    G     APIAIG  +    L + P +  S+NP RS GPA+  G +
Sbjct:    9 AELIGTFWLVLGGCGSAVL-------AASSPLGIGVLGVAFAFGLTVLTMAFAIG-HISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGW 200          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 67/205 (32.68%), Postives = 92/205 (44.88%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATA-------ADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPDTGS 741
            AEF  T   VF G GSAI        AA  P    G + +A+  G   L +A A+G  ISGGH NPAV+ GL + G++     I YW+AQ+LG+I A+ +L V+  G    +                     GL+  +  TA             +    APIAIGF +    L + P +   +NP RS G A+    F DT +
Sbjct:    7 AEFFGTFWLVFGGCGSAIL-------AAAFPELGIGFLGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAGFAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVAL----FADTAA 199          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   KA  +EF++TLLFVF G+GSA+ + +        PSGL  IA+  G A+   V    +ISG H+NPAVT    +G  ++ L  IFY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSKAVFSEFLATLLFVFFGLGSALNWPQAL------PSGL-QIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALLHELT 103          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 66/205 (32.20%), Postives = 91/205 (44.39%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATA-------ADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPDTGS 741
            AEF  T   VF G GSAI        AA  P    G + +A+  G   L +A A+G  ISGGH NPAV+  L + G++     I YW+AQ+LG+I  + +L V+  G    +                     GL+  +  TA             +    APIAIGF +    L + P +  S+NP RS G A+    F DT +
Sbjct:    7 AEFFGTFWLVFGGCGSAIL-------AAAFPELGIGFLGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAGFAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL----FADTAA 199          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 60/202 (29.70%), Postives = 88/202 (43.56%), Query Frame = 1
Query:  145 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYAT--------AADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            FK   AEF+ T   V  G GSA+  +           GL+ ++   G  +         ISGGH NPAV+ GLA+ G++   + + Y IAQ+ G+I+A+ +L V+  G A                      T  LV  V  T         +  ++   G  APIAIG  +    L + P +  S+NP RS G A+  G +
Sbjct:    2 FKKLCAEFLGTCWLVLGGCGSAVLASAFPQVGI----GLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG-FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVGGW 198          
The following BLAST results are available for this feature:
BLAST of FC875627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
NIP41_ARATH3.096e-1429.79Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
AQPZ_BRUAB3.096e-1433.33Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA23.096e-1433.33Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP6_HUMAN3.096e-1434.17Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQPZ_BRAJA4.044e-1433.00Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
AQPZ_PSEPK9.008e-1432.35Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ_BRUME1.177e-1332.68Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQP2_ORYAF2.007e-1341.82Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
AQPZ_BRUSU2.621e-1332.20Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQPZ2_RHIME3.423e-1329.70Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC31401A08EF CTVClemen1 Citrus clementina cDNA clone C31401A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875627 ID=FC875627; Name=FC875627; organism=Citrus clementina; type=EST; length=743bp
GCTCGACCGAGATAAACCTTATCTTCTTCTTCTTCTTAAGAAAGACTCGA
GAGAGTTTTTTTTTTCCCCTATTCTCTAGCTCTTTCTTGATCAACAATGG
CTATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAG
GCCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGT
TGGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGATC
CATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTGTC
GCAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGT
CACCTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCT
TCTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTC
AAAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTGG
AGTTGGAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTT
TGGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATTG
GGCACCATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATCCT
GGCCGCCGGCCCATTCTCCGGTGGTTCCATGAACCCGGNCCGTTCCTTCG
GGCCTGCCGTTGCCAGCGGCAACTTCCCAGACACTGGATCTAC
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