FC875627

Overview
NameFC875627
Unique NameFC875627
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length743
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 61/207 (29.47%), Postives = 86/207 (41.55%), Query Frame = 1
Query:  148 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS----GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-----------LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGN 723
            K Y+AEFI T   V  G GSA+    + A    + +    G + +A+  G  +F       +ISGGH NPAV+FGL +G +        Y  AQ+LG+IVAS  + +V  G           LA                          ++ +       K    G  AP AIG  +    L + P +  S+NP RS G A+  GN
Sbjct:    2 KKYIAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG-FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGN 207          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 1
Query:  145 FKAYLAEFISTLLFVF-AGVGSAIAFNKMTADAALD---PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFP 729
            F A + EF  T +F++ A V   +A + +   AA D   P  L+ IAI  GF++  ++   A +SGG +NPAV+  L L   ++    +  W++Q++  + A      +T G  +  ++                 T  L  TV  TA + ++ +     PI I   +    L A  ++G  +NP RS G AVA+  FP
Sbjct:   49 FIAAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETNFMAALPIGISLFIAHVALTA--YTGTGVNPARSLGAAVAARYFP 245          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   +A L+EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    +ISG H+NPAVT    +G  ++ L  +FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALLHELT 103          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12
Identity = 62/207 (29.95%), Postives = 92/207 (44.44%), Query Frame = 1
Query:  148 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFV---AVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            + +++EF+ T   VF G GSA+        AA    G+  + +   F L V   A A+G  ISGGH NPAV+ GL + G+      + Y +AQ+LG++VA+  L V+  G A              H+                  F LV  + +T      G     AP+AIG  +    L + P +  S+NP RS G A+  G +
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFA------AAFPELGIGFLGVAFAFGLTVLTMAYAVGG-ISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVG----FAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGW 198          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   +A LAEF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    ++SG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  +T
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSALNWPQAM------PS-VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALLHEIT 103          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 66/205 (32.20%), Postives = 93/205 (45.37%), Query Frame = 1
Query:  160 AEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL------------AVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            AEF+ TL  V  G GSA+        AA  P    GL+ +++  G   L +A AIG +ISG H+NPAV+FGL  GG+      + Y IAQ+ G I  + +L ++  G                 H+                  F L+  + +T     KG     APIAIG  +    L + P S  S+NP RS GPA+  G++
Sbjct:    7 AEFLGTLWLVLGGCGSAVL-------AAAFPEVGIGLLGVSLAFGLTVLTMAFAIG-HISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG----FAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVGDW 199          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_DASNO (Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   +A LAEF++TL+FVF G+GSA+++ +        PS ++ IA+  G A+   V    ++SG H+NPAVT    +G  ++ L   FY  AQLLG++  + +L  +T
Sbjct:    1 SVAFSRAVLAEFLATLIFVFFGLGSALSWPQAL------PS-VLQIALAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEIT 103          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 66/205 (32.20%), Postives = 90/205 (43.90%), Query Frame = 1
Query:  157 LAEFISTLLFVFAGVGSAIAFNKMTADAALDPS---GLVAIAICHGFA-LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726
            LAEF  T   VF G GSA+        AA  P    G   +A+  G   L +A A+G  ISGGH NPAV+ GL + G+    + + Y IAQ+ G+IVA+  L V+  G A              H+                  F L+  + +T      G     APIAIG  +    L + P +  S+NP RS G A+  G +
Sbjct:    6 LAEFFGTFWLVFGGCGSAVF-------AAAFPELGIGFTGVALAFGLTVLTMAYAVGG-ISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGW 198          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   +A  AEF++TL+FVF G+GSA+ + +        PS ++ IA+  G A+   V    +ISG H+NPAVT    +G  ++ L   FY  AQLLG++  + LL  VT
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSALNWQQSL------PS-VLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALLHEVT 103          
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP2_ERIEU (Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  133 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 462
            S+   +A   EF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V +  +ISG H+NPAVT    +G  I+ L   FY  AQLLG++  + LL  VT
Sbjct:    1 SIAFSRAVFTEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQMLGHISGAHINPAVTVACLVGCHISFLRAAFYVAAQLLGAVAGAALLHEVT 103          
The following BLAST results are available for this feature:
BLAST of FC875627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
AQPZ_SYNY35.839e-1329.47Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQY1_YEAST7.626e-1328.14Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQP2_PROHA1.301e-1239.09Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQPZ1_AGRT51.699e-1229.95Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQP2_HORSE1.699e-1239.09Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
AQPZ_SHEON2.219e-1232.20Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
AQP2_DASNO2.219e-1237.27Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=... [more]
AQPZ2_AGRT52.898e-1232.20Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
AQP2_TALEU2.898e-1239.09Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_ERIEU3.785e-1240.00Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31401A08EF CTVClemen1 Citrus clementina cDNA clone C31401A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875627 ID=FC875627; Name=FC875627; organism=Citrus clementina; type=EST; length=743bp
GCTCGACCGAGATAAACCTTATCTTCTTCTTCTTCTTAAGAAAGACTCGA
GAGAGTTTTTTTTTTCCCCTATTCTCTAGCTCTTTCTTGATCAACAATGG
CTATTGCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAG
GCCTATCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGT
TGGCTCGGCCATTGCTTTCAACAAGATGACAGCAGATGCAGCACTTGATC
CATCAGGGCTAGTAGCCATCGCTATTTGCCATGGATTTGCTCTATTTGTC
GCAGTTGCAATTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGT
CACCTTTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCT
TCTACTGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTC
AAAGTTGTCACTGGAGGCTTGGCAGTTCCTACCCACAATGTTGCTGCTGG
AGTTGGAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTT
TGGTCTACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATTG
GGCACCATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATCCT
GGCCGCCGGCCCATTCTCCGGTGGTTCCATGAACCCGGNCCGTTCCTTCG
GGCCTGCCGTTGCCAGCGGCAACTTCCCAGACACTGGATCTAC
back to top