FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + DGYSGS Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGS 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + DGYSGS Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGS 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + DGYSGS Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGS 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + DGYSGS Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGS 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.108e-35 Identity = 75/157 (47.77%), Postives = 112/157 (71.34%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK-EELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +++TSK+ GEGEK V+A+F++A ++ PS++F+DE+DS+L R GEH+A R++K EF++ +DG+++ ERVLV+ ATNRP +LDEAV+RR +R+ V LP R K+++ +L+K S +L + DGYSGS Sbjct: 345 AKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQKELSQLARLTDGYSGS 500
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.447e-35 Identity = 76/157 (48.41%), Postives = 111/157 (70.70%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 AKAVA E+ + F+NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R++ EHEA R++K EF+V +DGL T +ERVLV+ ATNRP +LD+A +RR +R+ V LPD R ++ +L K D L+ + +GYSGS Sbjct: 424 AKAVAHESNSTFLNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKD-NEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFTKRVYVTLPDHNTRVILLEKLLKKHNNPLSADKLKYLARLTEGYSGS 579
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.447e-35 Identity = 73/157 (46.50%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ ++R+LV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ + +L M DGYSGS Sbjct: 389 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGS 544
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 75/157 (47.77%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L M DGYSGS Sbjct: 357 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGS 512
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 75/157 (47.77%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L M DGYSGS Sbjct: 390 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGS 545
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 75/157 (47.77%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L M DGYSGS Sbjct: 392 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGS 547 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |