FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_NEMVE (Spastin OS=Nematostella vectensis GN=v1g144095 PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20 Identity = 52/127 (40.94%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 92 YVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK-EELASDVDLEGNCNMADGYSGS 469 +VK++ LAS + S+ +DEVDS+L R GEHE R++K EF+V++DG+ +ER+LV+ ATNRP +LD+A +RR+ +R+ + LPD R+ ++ +LAK S +++ M + YSGS Sbjct: 404 FVKSLEDLASILTTSLFTIDEVDSLLTERRE-GEHEHSRRLKTEFLVSFDGVVADPEERILVMGATNRPQELDDAALRRMVKRIHIPLPDKETRKVLLTKLLAKHHNPLSGAEIDRLARMTEHYSGS 529
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20 Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKAVA E A FI I S K+ GEG + V+ VF LA + +PS++F+DE+D++ +R G+ E R + + + DG ++ V ++AATNRP LD A++R R R + V LP+ R +I+++ + LA +VD+E + DG SG+ K Sbjct: 202 AKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLM-QLLAELDGFESRG--NVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLK 362
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20 Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSKTCV 487 AKAVA E A FI + S + +K+ GEG + V+ +F LA + APS++F+DE+D++ +R + G+ E R M + + DG D V V+AATNR +D AV+R R R + V LP R +I+ + K ++A DVDLE + +G+SG+ K V Sbjct: 190 AKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTML-QLLAELDGFDPLD--NVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVV 353
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20 Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+AVA E GA F I+ I SK GE E ++ F A K APS++F+DE+DS+ +RE E R++ ++ + DGL K + V+V+ ATNRP +D A+ R R R + + +PD R +++R+ +LA DVDLE GY G+ Sbjct: 258 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-NGEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGA 412 HSP 2 Score: 98.5969 bits (244), Expect = 1.717e-20 Identity = 56/161 (34.78%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHE---AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A E ANFI++ + + WFGE E V+ +F A + AP V+F DE+DS+ +R + A ++ N+ + DG+ K+ V ++ ATNRP +D A++R RL + + + LPD +R I + L K +A DVD+ G+SG+ Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNA--KKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGA 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 59/161 (36.65%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F IS S + G G V+ +F A K AP ++F+DE+D+ +GR+ G H+ + N+ +V DG + E ++V+AATNRP LD A++R R R+++V LPD RE+I++V + + LA+D+D G+SG+ Sbjct: 202 AKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA-VGRQRGAGLGGGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGA 359
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 59/161 (36.65%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F IS S + G G V+ +F A K AP ++F+DE+D+ +GR+ G H+ + N+ +V DG + E ++V+AATNRP LD A++R R R+++V LPD RE+I++V + + LA+D+D G+SG+ Sbjct: 202 AKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA-VGRQRGAGLGGGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGA 359
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 59/158 (37.34%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+AVA E GA F I+ I SK GE E ++ F A K APS++F+DE+DS+ +RE E R++ ++ + DGL K + V+V+ ATNRP +D A+ R R R + + +PD R +++R+ +L+ DVDLE GY G+ Sbjct: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-HGEVERRIVSQLLTLMDGL--KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGA 413 HSP 2 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A E ANFI++ + + WFGE E V+ +F A + AP V+F DE+DS+ +R + A ++ N+ + DG+ K+ V ++ ATNRP +D A++R RL + + + LPD +R +I + L K +A +VDL G+SG+ Sbjct: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGA 689
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 60/159 (37.74%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNC-NMADGYSGS 469 AKA A EAGANF++I + + +K+ GE E ++ +F A AP V+F DEVD++ R G + ++ N+F+V DG ++ V V+ ATNRP +D A +R R L V LP+A R I++ I K+ + VDL+G N +G+SG+ Sbjct: 579 AKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAW-VVERLLNQFLVELDG---GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGA 733 HSP 2 Score: 82.8037 bits (203), Expect = 9.752e-16 Identity = 53/166 (31.93%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKER--------VLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A A+A EAG F IS + + S G E+ ++ +FS A + APS+VF+DE+D++ +REN + E +++ + + DG K + VLV+ ATNRP LD A+ R R + + PD R +I+ V+ K L D + + G+ G+ Sbjct: 284 ANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQ-QREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGA 448
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.826e-20 Identity = 57/158 (36.08%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+AVA E GA F I+ I SK GE E ++ F+ K +P+++F+DE+D++ +RE E +++ ++ + DGL+T + V+V+AATNRP +D A+ R R R + + +PDA R +I+R+ +L DVDLE N G+ G+ Sbjct: 260 ARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK-AHGEVEKRIVSQLLTLMDGLKT--RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGA 414 HSP 2 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A E ANFI+I + + WFGE E V+ VF A AP V+F DE+DS+ R A ++ N+ + DG+ K+ V ++ ATNRP +D AV+R RL + + + LPD +R +I + L K L++D+DL G+SG+ Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNA--KKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGA 690
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.826e-20 Identity = 61/164 (37.20%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKAVATE+ A FI + S K+ GEG + V+ VF LA + APS+VF+DE+D++ +R + GE E R + + + DG + D V ++AATNR LD A++R R R + V LP+ R++I R+ L K + ++ + +M +G+SG+ K Sbjct: 185 AKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLM-QLLAEIDGFKPLD--NVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIK 345 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |