FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE +++G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFNPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKAVA A A FI ++ + K+ GEG + V+ +F LA + APS++F+DE+D++ RR G+ E R + + + DG D + V+AATNR LD A++R R R + + LPD R +I ++ LA DVDL+ + +G SG+ K Sbjct: 230 AKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTL-TQLLAEMDGFDPLDD--IKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIK 390
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.526e-20 Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVIL---AKEELASDVDLEGNCN 445 AKAVA E+G NFI++ + + + GE E+ V+ VF A AP V+F DEVD++ RR + E A ++ N+ + DGL T +++V +LAATNRP +D A++R RL + L V LP +R I++ I K L DV+LE N Sbjct: 631 AKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD-RETGASVRVVNQLLTEMDGLET--RQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIAN 780 HSP 2 Score: 70.8626 bits (172), Expect = 3.835e-12 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A A+A E + ++ I S GE E+ ++ +F A AP +VF+DE+D++ +RE + R++ + + D L RVLV+ ATNRP LD A+ R R R + + +PD RE+I++ + K L + ++ G+ G+ Sbjct: 314 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKRE-VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGA 471
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.523e-20 Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 AKAVATE+ A FI++ S K+ GEG + V+ +F +A + APS++F+DE+D++ +R GE E R + + + DG D V ++AATNR LD A++R R R + V LPD R +I + L K ++ +++LE + +G+SG+ K CV Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFDPLD--NVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCV 349
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.523e-20 Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+AVA EAG F + S S + G G + V+ +F+ A K +P ++F+DE+D++ G R NP + + MR N+ +V DG K E ++V+AATN P LD+A+VR R R ++V PD R +I+ + K + DVDL G+SG+ Sbjct: 273 ARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSR-NPKDQQYMRMTLNQLLVELDGF--KQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGA 427 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |