FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L DGYSGS Sbjct: 545 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGS 701
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 74/157 (47.13%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L + DGYSGS Sbjct: 389 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL-RERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGS 544
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 77/158 (48.73%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + +GYSGS Sbjct: 552 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGS 708
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.210e-35 Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMA---DGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++VLAATNRP +LDEA +RR +R+ V+LP+ RE ++ +L K+ S +D E +A DGYSGS Sbjct: 540 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPEVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGS 696
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.210e-35 Identity = 74/157 (47.13%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L M +GYSGS Sbjct: 390 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGS 545
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.210e-35 Identity = 72/161 (44.72%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-----TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE G F N+S +S+TSK+ GE EK V+ +F +A APS +F+DE+DS+ +R EHEA R++K+E ++ DG+ + + V+VLAATN P+D+DEA+ RRL +R+ + LP+ RE+++R+ L + LA D+DL+ DGYSG+ Sbjct: 284 AKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGA 444
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 73/157 (46.50%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+FS+A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ ++ +L + +GYSGS Sbjct: 379 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGS 534
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 74/157 (47.13%), Postives = 114/157 (72.61%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 AKAVA E+ A F NIS +S+TSK+ GEGEK V+A+FS+A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LD+AV+RR +R+ V LP+ R +++ +L+K+ S+ +L + +GYSGS Sbjct: 376 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGS 531
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 73/156 (46.79%), Postives = 112/156 (71.79%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 K +A ++GA F +IS SS+TSKW GEGEK V+A+F++A P+V+F+DE+DS+L +R GEHE+ R++K EF+V DG T +R+LV+ ATNRP ++DEA RRL +RL + LP+A R++I+ ++AKE + ++ ++E ADG+SG+ Sbjct: 434 KCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR-GEGEHESSRRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGA 588
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 72/156 (46.15%), Postives = 114/156 (73.08%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 K +A+++GA F +IS SS+TSKW GEGEK V+A+F++A P+V+F+DE+DS+L +R + GEHE+ R++K EF+V DG T ++R+LV+ ATNRP ++DEA RRL +RL + LP+A R++I+ +++KE+ SD + + +DG+SG+ Sbjct: 461 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGD-GEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGA 615 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |