FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.752e-16 Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR---RENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEEL 412 AKA A E+G F++IS S + G G V+ +F A + APS++F+DE+D+ +GR R G ++ N+ +V DG T V+VLA TNRP LD+A++R R R++ ++ PD R++I ++ L K +L Sbjct: 372 AKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDA-IGRARGRGGLGGNDERESTLNQLLVEMDGFGT--TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKL 510
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.274e-15 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR---RENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE----GNCNMADGYSGS 469 AKA A EA FI +S S + G G V+ +F+LA K AP ++F+DE+D+ +GR R N G N+ +V DG T V++LA TNRP LD A++R R R++ + PD R I +V L +L S ++ E ++ G+SG+ Sbjct: 359 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA-VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNT--TTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGA 520
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15 Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR----ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 A+AVA FI +S S + K+ GEG + V+ +F +A + APS++F+DE+DS+ R G+ E R M E + DG +K + VL ATNR LD+A++R R+ R++ P+ +R I+++ K L +DL+ +G SG+ K Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNK--IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15 Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR----ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 A+AVA FI +S S + K+ GEG + V+ +F +A + APS++F+DE+DS+ R G+ E R M E + DG +K + VL ATNR LD+A++R R+ R++ P+ +R I+++ K L +DL+ +G SG+ K Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNK--IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15 Identity = 54/168 (32.14%), Postives = 93/168 (55.36%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 A+A A + A F+ ++ + + G+G K V+ F+LA + APS++F+DE+D++ +R E G+ E R M E + DG + +V V+AATNR LD A++R RL R++ +P+ R +I+++ K ++ DV+ E D ++G+ K CV Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLNQLDGF--QPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCV 401
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15 Identity = 54/168 (32.14%), Postives = 93/168 (55.36%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 A+A A + A F+ ++ + + G+G K V+ F+LA + APS++F+DE+D++ +R E G+ E R M E + DG + +V V+AATNR LD A++R RL R++ +P+ R +I+++ K ++ DV+ E D ++G+ K CV Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLNQLDGF--QPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCV 401
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15 Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 KAVA A FI ++ S K+ GEG + V+ VF LA + APS+VF+DEVDS+ +R + ++++ E + DG V V+ ATNR +D A++R RL R++ LPD + + I +K L VD+E Sbjct: 186 KAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGF--DPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIE 330
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F +IS S + G G V+ +F + AP ++F+DE+D+ +GR G ++ + N+ +V DG E V+++AATNRP LD A++R R R++ V PD RE+I++V L K + S V G+SG+ Sbjct: 205 AKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA-VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEA--NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGA 362
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F +IS S + G G V+ +F + AP ++F+DE+D+ +GR G ++ + N+ +V DG E V+++AATNRP LD A++R R R++ V PD RE+I++V L K + S V G+SG+ Sbjct: 205 AKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA-VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEA--NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGA 362
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F +IS S + G G V+ +F + AP ++F+DE+D+ +GR G ++ + N+ +V DG E V+++AATNRP LD A++R R R++ V PD RE+I++V L K + S V G+SG+ Sbjct: 205 AKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA-VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEA--NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGA 362 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |