FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EA F +IS S + G G V+ +F + AP ++F+DE+D+ +GR G ++ + N+ +V DG E V+++AATNRP LD A++R R R++ V PD RE+I++V L K + S V G+SG+ Sbjct: 205 AKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA-VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEA--NEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGA 362
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVD 427 AKAVA++ A+FI ++ S + K+ GEG K V+ +F +A P+VVF+DE+D++ +R + G+ E R M + + DG ++ + ++AATNR LD A++R R R + V P+ REKI R+ +A VD Sbjct: 200 AKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMM-QLLSEMDGF--DERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVD 343
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRL-MVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 KAVA A FI ++ S K+ GEG + V+ VF LA + APS++F+DEVDS+ +R G ++++ E + DG V V+ ATNR LD A++R RL R++ L D R I I +K LA + DL+ D SG+ Sbjct: 224 KAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGF--DQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGA 381
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 56/163 (34.36%), Postives = 91/163 (55.83%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 A VA E+G NFI+I + SK+ G E+ V+ VF A P ++F DE +S+ RR +N G + ++ N+ + DG+ + + V VLAAT+RP +D A++R RL + + PD +R +I+ V+ LA DVDL+ ++ D ++G+ K Sbjct: 892 AGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTD---RVVNQLLTQLDGV--EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLK 1049
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 57/163 (34.97%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR-ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL------AKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F NIS S+I SKW G+ EK V+ +F LA APS +F+DE++S++ +R PGE LD A++RRL +R++V+LP R+ +I+ L + EL D+D DGYSGS Sbjct: 308 AKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTGPGE-------------------------------------LDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPISNSSGVELRMDLDYSTLGEETDGYSGS 433
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR---RENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE----GNCNMADGYSGS 469 AKA A EA FI +S S + G G V+ +F+LA K AP ++F+DE+D+ +GR R N G N+ +V DG T V++LA TNRP LD A++R R R++ + PD R I +V L +L S ++ + ++ G+SG+ Sbjct: 358 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA-VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNT--TTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGA 519
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 51/158 (32.28%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+A A EAG +F +S S + G G K ++ +F+ A AP+++F+DE+D++ G+R NP + ++ N+ +V DG ++++ ATN P LD+A+ R R + + V+LPD R I++ + K LA +VD G SG+ Sbjct: 331 ARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKR-NPKDQAYAKQTLNQLLVELDGF--SQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGA 485
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN---PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGN-CNMADGYSGS 469 AKA A EAG F +S S + G G V+ +F A + APS+VF+DE+D++ R+ G ++ N+ +V DG D V+VLA TNRP LD+A++R R R + ++ P+ R+ I V L +LA ++ DL+ + G+SG+ Sbjct: 398 AKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPAD--HVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGA 558
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN----PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 A+AVA FI +S S + K+ GEG + V+ +F +A + APS++F+DE+DS+ R + G+ E R M E + DG + + V+ ATNR LD A++R R+ R++ P A R +I+R+ L +DL+ +G SG+ K Sbjct: 196 ARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTML-ELLNQLDGFEA--TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELK 357
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 50/148 (33.78%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREK---IIRVILAKEELASDVDLE 433 AKA+AT NF ++ + + + GE E V+ VF A P V+F DEVDS+ +R N G+ M ++ ++ + DG+ + D + V ++ ATNRP LDEA++R ++ L A REK I+R + K +++SD++ + Sbjct: 768 AKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGM-SSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFD 914 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |