FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN----PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEEL 412 AKA A EA F+++S S + G G V+ +F+ A +APS++F+DE+D++ R G ++ N+ +V DG T D +V+VLA TNRP LD A++R R R + ++ PD R++I V L + L Sbjct: 338 AKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSD--QVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNL 478
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.706e-15 Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR---RENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE----GNCNMADGYSGS 469 AKA A EA FI +S S + G G V+ +F+LA K AP ++F+DE+D+ +GR R N G N+ +V DG T V++LA TNRP LD A++R R R++ + PD R I +V L +L S ++ + ++ G+SG+ Sbjct: 357 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA-VGRKRGRGNFGGQSEQENTLNQLLVEMDGFNT--TTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGA 518
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15 Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 A+AVA FI +S S + K+ GEG + V+ +F +A + APS++F+DE+DS+ R N G +++ E + DG + + + V+ ATNR LD A++R R+ R++ P+ R +I+++ K L +DLE + G SG+ K Sbjct: 247 ARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHN--NIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVK 407
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15 Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSM---LGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEEL 412 AKA A E+ F++IS S + G G V+ +F A + APS++F+DE+D++ GR G ++ N+ +V DG T V+VLA TNRP LD+A++R R R++ ++ PD R++I ++ L K +L Sbjct: 377 AKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGT--TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKL 516
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.321e-15 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 A+A A + A F+ ++ + + G+G K V+ F LA + AP ++F+DE+D++ +R E G+ E R M E + DG ER+ V+AATNR LD A++R RL R++ P R +I+++ K + DV+ E D ++G+ K CV Sbjct: 222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGF--SSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCV 386
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.321e-15 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 A+A A + A F+ ++ + + G+G K V+ F LA + AP ++F+DE+D++ +R E G+ E R M E + DG ER+ V+AATNR LD A++R RL R++ P R +I+++ K + DV+ E D ++G+ K CV Sbjct: 222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGF--SSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCV 386
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.321e-15 Identity = 51/161 (31.68%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA+A EAG F +IS S + G G V+ +F A + +P +VF+DE+D+ +GR+ G ++ + N+ + DG + ++++AATNR LD A++R R R++ V++PD R +I+ V ++L + LE G+SG+ Sbjct: 223 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDA-VGRQRGTGIGGGNDEREQTLNQLLTEMDGF--EGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGA 380
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15 Identity = 51/164 (31.10%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSKTCV 487 AKAV+ EA F+ S SS G G ++ +F+ A + +P +VF+DE+DS+ G R H + N+ + DG ++ KE ++VL ATN+ LD+A++R R ++ V+ P R ++ + L K + S++D+E + GY+G+ + V Sbjct: 216 AKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHPFANQTINQLLAEMDGFQS--KEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLV 377
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15 Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVA + A+FI ++ S + K+ GEG + V+ +F LA + P+++F+DE+D++ +R + G+ E R M + + DG ++ + ++AATNR LD A++R R R + V P+ RE+I+ + + +A VD +SG+ Sbjct: 203 AKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMM-QLLSEMDGF--DERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGA 360
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15 Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRL-MVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 KAVA ANFI + S K+ GEG + V+ VF +A + AP+++F+DE+D++ +R G ++++ E + DG V V+ ATNR LD A++R RL R++ + D R + + I AK L+ +VDL+ D SG+ Sbjct: 186 KAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGA 343 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |