FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.182e-35 Identity = 75/159 (47.17%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKA+A ++ A FIN+S+ +T KWFGE K V A+F+LA K+ P+++F+DE+D+ L +R+ +HEAM ++K EFM WDGL + RVLVL ATNRP D+DEA+ RR+P+ + LP+A R KI+ + L K L ++ D G N G SGS K Sbjct: 142 AKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT-DHEAMAQIKAEFMSMWDGL-LSGQSRVLVLGATNRPADIDEAIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIK 298
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.182e-35 Identity = 72/156 (46.15%), Postives = 113/156 (72.44%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 K +A ++GA F +IS SS+TSKW GEGEK V+A+F++A P+V+F+DE+DS+L +R GEHE+ R++K EF+V DG T ++R+LV+ ATNRP ++DEA RRL +RL + LP+A R++I+ +++KE + ++ ++E ADG+SG+ Sbjct: 433 KCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR-GEGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVSLMSKEHCSLTEQEVEAIVLQADGFSGA 587
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.182e-35 Identity = 72/156 (46.15%), Postives = 114/156 (73.08%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 K +A+++GA F +IS SS+TSKW GEGEK V+A+F++A P+V+F+DE+DS+L +R + GEHE+ R++K EF+V DG T ++R+LV+ ATNRP ++DEA RRL +RL + LP+A R++I+ +++KE+ +D + E +DG+SG+ Sbjct: 455 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGD-GEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGA 609
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.225e-34 Identity = 78/160 (48.75%), Postives = 113/160 (70.62%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMA---DGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++VLAATNRP +LDEA +RR +R+ V+LP RE ++ +L K+ S +D E +A DGYSGS Sbjct: 544 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPGVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGS 700
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.225e-34 Identity = 71/156 (45.51%), Postives = 114/156 (73.08%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 K +A+++GA F +IS SS+TSKW GEGEK V+A+F++A P+V+F+DE+DS+L +R + GEHE+ R++K EF+V DG T ++R+LV+ ATNRP ++DEA RRL +RL + LP+A R++I+ +++KE+ S+ ++E +D +SG+ Sbjct: 452 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGD-GEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGA 606
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.729e-34 Identity = 72/161 (44.72%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK------DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSG 466 AKAVATE G F N+S +++ SKW GE E+ V+ +F LA APS +F+DE+DS+ R GEHE+ R++K+E +V DG+ ++ V+VLAATN P+D+DEA+ RRL +R+ + LPD +R+ +I + L E+ASDV++E +GYSG Sbjct: 289 AKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSG 449
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.729e-34 Identity = 74/161 (45.96%), Postives = 111/161 (68.94%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL----RTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ GRR EHEA R++K+E +V DG+ ++D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + ++ASDVDL +GYSG+ Sbjct: 256 AKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVDVASDVDLTVFAEKIEGYSGA 416
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.655e-34 Identity = 77/157 (49.04%), Postives = 109/157 (69.43%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL--AKEELASDVDLEGNCNMADGYSGS 469 + VA++A A F NIS SS+TSKW GEGEK V+A+FS+A PSV+F+DE+DS+L R + EHE+ R++K EF+V DG+ T ER+LVL ATNRP +LDEA RR +RL + LP+ +R +I+ +L + E+ +D +LE + DGYSG+ Sbjct: 367 RCVASQAQATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSAR-SESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPDSRTQIVENLLRGTRHEI-TDHNLEKIRRLTDGYSGA 521
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.037e-33 Identity = 75/161 (46.58%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F NIS S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E DGYSG+ Sbjct: 260 AKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGA 420
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.037e-33 Identity = 75/161 (46.58%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F NIS S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E DGYSG+ Sbjct: 256 AKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGA 416 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |