FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKER--VLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNRE-KIIRVILAKEELASDVDL 430 AKA+ATE NF ++ + + + GE E V+ VF A P VVF DE+DS+ +R N G+ M ++ ++ + DG+ D V V+ ATNRP LD A++R R + L + + D +++ KI+ + K L V L Sbjct: 1044 AKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSL 1192
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 51/149 (34.23%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A +VF DEVD++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ LPD R +I ++ D+ E Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFE 364
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 51/149 (34.23%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A +VF DEVD++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ LPD R +I ++ D+ E Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFE 364
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 48/168 (28.57%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK-TCV 487 A+A A + + ++ ++ + + G+G K V+ F+LA + P+++F+DE+D++ +R E G+ E R M E + DG + V+AATNR LD A++R RL R++ LP+ R I+++ K +++DV+ + ++ ++G+ K CV Sbjct: 219 ARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGF--SSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCV 383
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13 Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRV 391 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + V+ ATNRP LD A++R R+ R++ +LPD R I R+ Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTML-ELITQLDGF--DPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRI 391
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I+++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12 Identity = 49/167 (29.34%), Postives = 85/167 (50.90%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEE---------LASDVDLEGNCNMADGYSGS 469 A AVA + G NFI++ I +K+ G E+ ++ +F A + P ++F DE DS+ +R + R + N+ + DG D V +LAAT+RP +D A++R RL + ++ N+P R I++ I+ ++ L + DL+ G+SG+ Sbjct: 748 ASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDR-VVNQLLTQMDGAEGLD--GVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGA 911
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |