FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A F+ + S + K+ GEG + V+ +F +A ++F DEVD++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ LPD R I + A D+ E Sbjct: 221 ARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFE 366
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLE 433 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ +LPD R I ++ + D+ E Sbjct: 226 ARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE 371
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.835e-12 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDV 424 A+AVA A FI + S + K+ GEG + V+ +F +A ++F DE+D++ G R + G++E R M E + DG + + VL ATNRP LD A++R RL R++ LPD R I+++ + + D+ Sbjct: 228 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTML-ELINQLDGF--DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDI 370
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_RAT (Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.008e-12 Identity = 46/147 (31.29%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNL-PDAPNREKIIRVILAKEELASDVDL 430 AKAVATE F+++ + + + G+ E+ V+ VF+ A AP ++F DE+DS+ R G+ M ++ ++ + DGL + + V V+ ATNRP LD A++R R + + V D ++ +++ I K +L + V L Sbjct: 752 AKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS--TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSL 896
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.008e-12 Identity = 46/147 (31.29%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNL-PDAPNREKIIRVILAKEELASDVDL 430 AKAVATE F+++ + + + G+ E+ V+ VF+ A AP ++F DE+DS+ R G+ M ++ ++ + DGL + + V V+ ATNRP LD A++R R + + V D ++ +++ I K +L + V L Sbjct: 755 AKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS--TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSL 899
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.543e-12 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNL-PDAPNREKIIRVILAKEELASDVDL 430 AKAVATE F+++ + + + G+ E+ V+ VF+ A AP ++F DE+DS+ R G+ M ++ ++ + DGL + + V V+ ATNRP LD A++R R + + V D ++ +++ I K +L V L Sbjct: 754 AKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHS--TQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSL 898
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.116e-11 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKD--KERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKE 406 AKA+ATE NF ++ + + + GE E V+ VF A P VVF DE+DS+ +R N G+ M ++ ++ + DG+ + V V+ ATNRP LD A++R R + L + + D +++ I L ++ Sbjct: 1041 AKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRK 1180
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.457e-11 Identity = 54/171 (31.58%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR-------ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELA--SDVDLEGNCNMADGYSGSXSKT 481 AKAVATEA F+ ++ G G V+++F A AP +V++DE+D++ +R N E + + N+ +V DG+ T D V+VLA+TNR LD A++R RL R + ++LP R +I L +L S + + G+SG+ K+ Sbjct: 359 AKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTL----NQLLVEMDGMGTAD--HVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKS 523 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |