FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL2_HUMAN (Putative fidgetin-like protein 2 OS=Homo sapiens GN=FIGNL2 PE=5 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.486e-11 Identity = 46/155 (29.68%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSG 466 + +AT+ GA + + +++ + EG + ++A F+ A PSV+ + E++++L R++ A ++ + DG + VLV+ T+RP LDEA RR R V LPD+P R +I++ LA++ A S+ +L G+SG Sbjct: 443 RCLATQLGATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLISELEALLPARDDGAA--AGGALQVPLLACLDGGCGAGADGVLVVGTTSRPAALDEATRRRFSLRFYVALPDSPARGQILQRALAQQGCALSERELAALVQGTQGFSG 595
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 53 SSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRV 391 S SKW GE E+ ++ +F A ++ PS++F DE+D + R + E + + + + DGL T+ +V+V+ ATNRP DLD A+ R R R LP+ R KI+ + Sbjct: 445 SDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQE-QTHSSIVSTLLALMDGLDTRG--QVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEI 556
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.537e-11 Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR-------ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELA--SDVDLEGNCNMADGYSGS 469 AKAVATEA F+ ++ G G V+++F A AP +V++DE+D++ +R N E + + N+ +V DG+ T D V+VLA+TNR LD A++R RL R + ++LP R +I L +L S + + G+SG+ Sbjct: 359 AKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTL----NQLLVEMDGMGTTD--HVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGA 519
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.537e-11 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRR-------ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEEL--ASDVDLEGNCNMADGYSGS 469 AKAVATEA F+ ++ G G V+++F A AP +V++DE+D++ +R N E + + N+ +V DG+ T D V+VLA+TNR LD A++R RL R + ++LP R +I L +L +S + + G+SG+ Sbjct: 359 AKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTL----NQLLVEMDGMGTTD--HVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGA 519
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX6_SCHPO (Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe GN=pex6 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.537e-11 Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEH-EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR 325 AKAVATE F++I + + + GE E V+ VF A +P V+F DE+DS+ R N + M ++ ++ + D + + + V V+ ATNRP LD +++R Sbjct: 705 AKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLR 813
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 7.232e-11 Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 2 AKAVATEA--GANFINISM---SSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAK--EELASDVDLEGNCNMADGYSGSXSK 478 A+A+A E GAN + M + SKW GE E+ ++ +F A + PS++F DE+D + R + + + + + + DGL + V+V+ ATNR LD A+ R R R L +LPD R I+ + +K E + L+G GY G+ K Sbjct: 456 ARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSK-QDQIHASIVSTLLALMDGL--DGRGEVVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLK 620
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.232e-11 Identity = 46/160 (28.75%), Postives = 85/160 (53.12%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIA---PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 KAVA E GA I +S +I GE E+ ++ +F A + A P+++F+DEVD++ +R + R + + + DG+ + +K ++ +AAT+RP +D A+ R R R +++ P R+ I+ ++++ DVD ++ GY G+ Sbjct: 243 KAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAPENRVVA-QLLTLMDGIDSDNK--MVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGA 399
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYS 463 A A+++ FI+I + K+ G+ E+ V+ +FS A P V+F DE DS+ RR R + N+ + DG + D V ++AAT RP +D A++R RL + + +LP+ R ++++ + + + + L+ + DGY+ Sbjct: 657 ASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVTDRVV-NQILTQMDGAESLDG--VYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYT 809 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |