FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.147e-33 Identity = 72/161 (44.72%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE +GYSG+ Sbjct: 258 AKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGA 418
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.147e-33 Identity = 72/161 (44.72%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE +GYSG+ Sbjct: 258 AKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGA 418
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.147e-33 Identity = 73/156 (46.79%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 5 KAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIR-VILAKEELASDVDLEGNCNMADGYSGS 469 + VA++ A F NIS SS+TSKW GEGEK V+A+FS+A PSV+F+DE+DS+L R + EHE+ R++K EF+V DG+ T ER+LVL ATNRP +LDEA RR +RL + LP+ +R +I++ +++ ++ +LE + DGYSG+ Sbjct: 367 RCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSR-SESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSGA 521
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.779e-33 Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F N+S S++TSK+ GE EK V+ +F +A +P+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV+L +GYSG+ Sbjct: 259 AKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGA 419
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.779e-33 Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE G F N+S S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + EL D+ LE +GYSG+ Sbjct: 258 AKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGA 418
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.497e-32 Identity = 69/159 (43.40%), Postives = 105/159 (66.04%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKAVA AG FIN+ +S++T KW+GE +K AVFS+A K P+++F+DE+DS L R++ +HE+ MK +FM WDG + ++++V+ ATNRP D+D A++RR+ R V +P+A R +I+ VIL E++ + V+L A+G SGS K Sbjct: 134 AKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQS-HDHESTAMMKAQFMTLWDGF-SSSGDQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLK 290
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.357e-32 Identity = 65/157 (41.40%), Postives = 106/157 (67.52%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 A+A+A+E+ + F +S + ++SKW G+ EK V+ +F LA APS++F+DE+D++ G+R N GEHEA R++K+EF+V DG + K D RV VLAATN P++LDEA+ RR +R+ + LPD R+K+I + + +++ + +G+SG+ Sbjct: 243 ARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGA 399
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.690e-32 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEEL---ASDVDLEGNCNMADGYSGS 469 AKAVA E+ F NIS SS+TSKW G+ EK ++ +F +A PS++F+DE+DS+L R + E R+MK EF+V +DG + +R+LV+ ATNRP++LD+AV+RR P+R+M+NLPD R+++I L K ++ S D+ + G+S S Sbjct: 319 AKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCERSEK-DAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLRRFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNS 476
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.706e-32 Identity = 70/156 (44.87%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIR-VILAKEELASDVDLEGNCNMADGYSG 466 AKAVA E+ F +IS SS+TSK+ G+GEK V+A+F++A+ PS++F+DE+DS+L R + E EA R++K E +V +DG RT ERVLV+ ATNRP DLD+A +RRL +R+ V LP+ R +II+ +++ + + + + GYSG Sbjct: 434 AKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFIDEIDSLLTERSS-NESEASRRLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALRRLVKRIYVGLPELETRLQIIQHLLVGQRHSLTKQQINSLAEVTQGYSG 588
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.706e-32 Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT------------------KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILA-KEELASDVDLEGNCNMADGYSGS 469 A+AVATE+ + F +IS SS+TSK+ GE EK V+A+F++A K++PS++FVDE+DS++G R N E+E+ R++KNEF+V W L + +D RVLVLAATN P+ +DEA RR RR + LP+ R + +L+ ++ ++ D + + +GYSGS Sbjct: 655 ARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGS 829 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |