FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.706e-32 Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F N+S S++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + +LA+DV+++ +GYSG+ Sbjct: 254 AKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGA 413
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 2.824e-31 Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV---DLEGNCNMADGYSGS 469 AKAVA E+ F NIS SS+TSKW G+ EK ++ +F +A PS++F+DE+DS+L R + E R+MK EF+V +DG + +R+LV+ ATNRP +LD+AV+RR P+R+M+NLPD R+++I L K + + D+ + G+S S Sbjct: 289 AKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCERSEK-DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNS 446
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31 Identity = 71/161 (44.10%), Postives = 110/161 (68.32%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGNCNMADGYSGSXSKT 481 AK++A++A A F +I+ SS+TSKW G+ EK VK +F++A+ P+++F+DEVDS+L +R + E+E+ ++KNEF+++ DG + ++ RVLV+ ATNRP +LDEAV RR RRL V LP R+KII ++ + + DV + + DGYSG+ T Sbjct: 300 AKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR-SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDT 459
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 6.291e-31 Identity = 68/160 (42.50%), Postives = 109/160 (68.12%), Query Frame = 2 Query: 2 AKAVATEAGAN-FINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMAD---GYSGS 469 A+AVA E G+ F+N+S +S+TSKW G+ EK V+A+F +A P+++F+DE+DS+L R N E E R+MK EF++ DG+ + +R+LV+ ATNRP +LD A++RR P+R+++++P+A R K+I +L K + + D+ L +A+ GYS S Sbjct: 228 ARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCER-NEKETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILRRFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNS 386
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.391e-30 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGNCNMADGYSGS 469 A+AVATE+ + F +IS SS+TSK+ GE EK V+A+F+LA K++PS++FVDE+DS+L R + G EHE R++K EF++ W L +T D RVLVLAATN P+ +D+A RR RR + LPD R + +L ++ + + D+E + YSGS Sbjct: 509 ARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGS 673
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.122e-30 Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK--EELASDVDLEGNCNMADGYSGS 469 AKAVATEAG+ F +IS S + SKW GE E+ V+ +F +A + PS++F+DE+DS+ G R + GE E+ R++K EF+V +G+ KD+ VLVL ATN P+ LD A+ RR +R+ + LP+A R ++ + + K EL S D + M DGYSGS Sbjct: 179 AKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSR-SEGESESSRRIKTEFLVQMNGV-GKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQ-DFKELAKMTDGYSGS 333
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.122e-30 Identity = 74/165 (44.85%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 A+AVATEA A F +IS SS+TSK+ G+ EK V+A+F +A + SV+FVDE+DS+L R + G EHE+ R++K EF++ W L +T RVLVLAATN P+ +DEA RR +R + LP+ R K + +L + ++ DLE N+ +GYSGS Sbjct: 429 ARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGS 593
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.509e-29 Identity = 74/164 (45.12%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL------AKEELASDVDLEGNCNMADGYSGS 469 AKAVATE F NIS S+I SKW G+ EK V+ +F LA APS +F+DE++S++ +R GEHE R+MK E +V DGL D + V VLAA+N P++LD A++RRL +R++V+LP R+ +I+ L + EL +D+D DGYSGS Sbjct: 308 AKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMDGLARSD-DLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGS 470
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 5.889e-29 Identity = 69/167 (41.32%), Postives = 110/167 (65.87%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDK-----ERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGNCNMADGYSGS 469 AKAVATE+ + F ++S SS+ SK+ GE EK V+A+F +A K++PS++F+DE+DSML R + E+E+ R++K E ++ W L +++D+ RVLVL ATN P+ +D+A RR R+L + LPD R ++ ++AK++ + D+D E M +G+SGS Sbjct: 521 AKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD-NENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGS 686
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.231e-27 Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRV-------ILAKEELASDVDLEGNCNMADGYSGS 469 AKAVATEA + F ++S S + SKW GE EK VK +F++A + PS++F+DEVD++ G R GE EA R++K E +V +G+ D + VLVL ATN P+ LD A+ RR RR+ + LPD R + + +L KE D M +GYSGS Sbjct: 183 AKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTR-GEGESEASRRIKTELLVQMNGV-GNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE------DYRTLGAMTEGYSGS 337 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |