FC875656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 133/230 (57.83%), Postives = 168/230 (73.04%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V K+VV + + T + RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A K +VLMATNR D LD ALLRPGR+D Sbjct: 96 KVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 131/230 (56.96%), Postives = 169/230 (73.48%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K +I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD TY VGG EQI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG++MVRELF MAR I+F DE+D+IG R + G GGD+EVQRTMLE++NQLDGF++ +++MATNR D LDPALLRPGR+D Sbjct: 91 KVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRID 320
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.203e-68 Identity = 132/230 (57.39%), Postives = 170/230 (73.91%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD-DGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE F LGI PKG+L YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG +R D G GD+EVQRTMLE++NQLDGF+A +V+MATNR D LDPALLRPGR+D Sbjct: 80 KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRID 309
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 5.970e-68 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+I G+R + G GGD+EVQRTMLE++NQLDGF+A +V+MATNR D LD ALLRPGR+D Sbjct: 79 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 306
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.797e-68 Identity = 127/238 (53.36%), Postives = 168/238 (70.59%), Query Frame = 1 Query: 4 IINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 +++ ED + V+ KFVV ++ +++ G RV +++ I LP DP V VEEKP+V+Y D+GG QIE++RE VELP+L PE F ++GI+PPKGVL YGPPGTGKTLLA+AVAN+T A FIRV+GSE VQKY+GEGAR+VRE+FQ+A+ K I+F DE+DAI R + GD EVQRTM++++ +LDGFD RG +V+ ATNR D LDPA+LRPGR D Sbjct: 67 VVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFD 304 The following BLAST results are available for this feature:
BLAST of FC875656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875656 ID=FC875656; Name=FC875656; organism=Citrus clementina; type=EST; length=718bpback to top |