FC875656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.018e-67 Identity = 124/231 (53.68%), Postives = 164/231 (71.00%), Query Frame = 1 Query: 25 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 + K +I KFVV ++ ++ G +V +++ + LP DPSV M V + P++ Y +GG + QI +++E VELP+L PE F K+GI+PPKGVL YGPPGTGKTLLA+AVANRT A FIR+IGSELVQKY+GEGARMVRELF++A+ K I+F DE+D+IG R D GD EVQRT+++++ ++DGFD RG ++L ATNRPD LDPALLRPGR D Sbjct: 92 NGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFD 322
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.330e-67 Identity = 119/232 (51.29%), Postives = 168/232 (72.41%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 +D + ++ +FVV + + + + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RG +V+ ATNRPD LDPALLRPGR D Sbjct: 69 DDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 300
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 254.988 bits (650), Expect = 2.963e-67 Identity = 126/231 (54.55%), Postives = 167/231 (72.29%), Query Frame = 1 Query: 25 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 D K ++ V+ K++V + ++ D++ RV + + Y + L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAVA+ TD FIRV G+ELVQKY+GEG+RMVRELF MAR I+F DE+D+IG R + GGD+EVQRTMLE++NQLDGF+ +++MATNR D LDPALLRPGR+D Sbjct: 81 DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRID 311
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.870e-67 Identity = 117/232 (50.43%), Postives = 166/232 (71.55%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQLDGFD GK +++MATNRPD LDPALLRPGRLD Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLD 302
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.870e-67 Identity = 132/230 (57.39%), Postives = 164/230 (71.30%), Query Frame = 1 Query: 31 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 K ++ V KFVV + V + R + Y + LP KIDP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF++ +VLM TNR D LDPALLRPGR+D Sbjct: 80 KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRID 309
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.870e-67 Identity = 115/232 (49.57%), Postives = 168/232 (72.41%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 + ++++ ++VVG + V + + +G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+ +PE F+++GI PPKGVL YGPPGTGKTLLARAVA F++V+ S +V KY+GE AR++RE+F A+ + C++F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD G+ +++MATNRPDTLDPALLRPGRLD Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLD 295
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.054e-67 Identity = 119/232 (51.29%), Postives = 168/232 (72.41%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PPKGVL YGPPG GKTL+A+AVAN +A FIRV+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RG +V+ ATNRPD LDPALLRPGR D Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 301
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.054e-67 Identity = 117/232 (50.43%), Postives = 166/232 (71.55%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQLDGFD GK +++MATNRPD LDPALLRPGRLD Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLD 302
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.600e-67 Identity = 122/232 (52.59%), Postives = 165/232 (71.12%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 +D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V EKP VTY D+GG + Q+ ++RE VELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A+AVAN +A FIRV+GSELV+K++GEGAR+V ELF+MA+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RG +V+ ATNRPD LDPALLRPGR D Sbjct: 70 DDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 301
BLAST of FC875656 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.600e-67 Identity = 119/232 (51.29%), Postives = 167/232 (71.98%), Query Frame = 1 Query: 22 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGKHQVLMATNRPDTLDPALLRPGRLD 717 +D + ++ +FVV + + + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RG +V+ ATNRPD LDPALLRPGR D Sbjct: 72 DDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 303 The following BLAST results are available for this feature:
BLAST of FC875656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875656 ID=FC875656; Name=FC875656; organism=Citrus clementina; type=EST; length=718bpback to top |