FC875676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28 Identity = 64/174 (36.78%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSNKQK 647 +K++ +GD VGKT ++ RF F T+ +T+GIDF +K + ++ V+LQ+WDTAGQERFRS+ +Y R + SF N W+ E++ DV+++L+GNK D ++R V E+GE ++E + F+ETSAK+G N+ F IA L T + ++ + Sbjct: 65 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPR 238
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 132 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 611 KL+ +GD VGK+ ++ RF+ DKF+ ++ TIGIDF +T+ + + ++LQ+WDTAGQERFR++ +Y R +SF N W V D I LVGNK D RQVS E+G+ + +LNV F+E SAK+ N+ +F ++A+ + Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASII 175
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 61/160 (38.12%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 132 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 611 KL+ +GD VGK+ ++ RF D+F ++ TIGIDF +T+ + ++ V+LQ+WDTAGQERFR++ +Y R +SF N W V++ V ++LVGNK DL EKR VS E+G+A + + + F+E S+K N++ F +A + Sbjct: 13 KLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRI 172
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 132 KLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 611 K++ LGD VGKT + +F F T+ AT+GIDF +K + ++ V+LQ+WDTAGQERFRS+ +Y R + SF N W+ E+ DV+I+L+GNK D+ +R + E+GE +RE V F+ETSAK G N++ F IA L Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 66/192 (34.38%), Postives = 108/192 (56.25%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG-------------METLSSNKQKNG*RES 665 +K++ +GD VGK+ ++ RF D + +T+ +TIG+DF KT+ L+ +T++LQ+WDTAGQERFR++ SY R + SF N +W+ E+ +V +LVGNKTDLV ++ V + ++ + + FIETSAK N++ F +A + ++ S NK K+G ++S Sbjct: 11 FKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPKPDEVDIKSKNKTKSGGKKS 202
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 57/157 (36.31%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 599 +K+V +GD +VGK++++TR+ ++F+ +ATIG++F +++M ++ + V+ Q+WDTAGQERFR++ +Y R +F N +W+DE+ T + V +L+GNK DL R VS+EEG++ + + F+ETSA N+K F + Sbjct: 13 FKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMV 169
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 63/201 (31.34%), Postives = 117/201 (58.21%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSNKQKNG*RESEVYTGMHHSPVSVSGCSVMHPG 731 +K+V +GD +VGK+ I+ RF ++F ++TIG++F ++T+ ++ +TV+ Q+WDTAGQER+R++ +Y R RQ+F + +W++E+R +++I+L+GNK DLV +R V E+ + + + + F+ETSA N++ F + + + NK+ ES+ + + S+SG ++ PG Sbjct: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNI----VNKKSLAADESQ----GNGNSASLSGQKIIIPG 210
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 56/154 (36.36%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 590 +K + +GD VGK+ ++ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE FRS+ SY R R +F + + W+++ R S+++I+L+GNK+DL +R+V EEGEA +RE ++F+ETSAK N++ F Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 56/154 (36.36%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 590 +K + +GD VGK+ ++ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE FRS+ SY R R +F + + W+++ R S+++I+L+GNK+DL +R+V EEGEA +RE ++F+ETSAK N++ F Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
BLAST of FC875676 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 56/154 (36.36%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 129 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 590 +K + +GD VGK+ ++ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE FRS+ SY R R +F + + W+++ R S+++I+L+GNK+DL +R+V EEGEA +RE ++F+ETSAK N++ F Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160 The following BLAST results are available for this feature:
BLAST of FC875676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875676 ID=FC875676; Name=FC875676; organism=Citrus clementina; type=EST; length=769bpback to top |