FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_MARMM (Chaperone protein dnaK OS=Maricaulis maris (strain MCS10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32
Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V FT D ERLIG  AK Q   NP  T F  KRLIGR   D +V+ D+ + P+K++   ++   +    +G +K+++  EIS+  L KM+E AE+YLG  ++ AV+TVPAYF+D+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGVRTTPSVVAFTEDGERLIGQPAKRQAVTNPDYTFFAIKRLIGRMMDDPTVKKDIDMVPYKIVPSDSNDAWV----QGRDKKYSPSEISAFTLQKMKETAESYLGEKVEKAVITVPAYFDDAQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32
Identity = 75/144 (52.08%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D  + P+K+I   AD     ++ KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDEAIMPYKIIG--ADNGDAWIDVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BLOFL (Chaperone protein dnaK OS=Blochmannia floridanus GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS V +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+K+ P+K+I+       + +  KG++   A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENSEGDRTTPSVVAYTQDGEILVGQPAKRQSVTNPKNTLFAIKRLIGRRFQDQEVQRDVKIMPYKIISSNNGDAWLDI--KGQK--IAPPQISAEILKKMKKTAEDYLGENVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_TOLAT (Chaperone protein dnaK OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G+RTTPS + +TD  E L+G  AK Q   NP NT++  KRLIGRR+ D  VQ D+K+ PF ++   AD     V+ KG  ++ AA +IS+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENAEGDRTTPSIIAYTDDGEILVGQPAKRQSITNPKNTLYAIKRLIGRRYEDEEVQRDIKIMPFDIVR--ADNGDAWVDVKG--RKLAAPQISAEVLKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_THIDA (Chaperone protein dnaK OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+K++        + V     +K+ AA+++S+ +L KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIVAYAEDGEILVGAPAKRQAVTNPKNTIFAVKRLIGRRFEEKEVQKDIGLMPYKIVKADNGDAWVEVR----DKKMAAQQVSAEILRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRR+ D  VQ D+ + P+K++A  AD     +  KG++   A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPQNTLFAIKRLIGRRYQDEEVQRDVSIMPYKIVA--ADNGDAWLEVKGQK--MAPPQISAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDTQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_SERP5 (Chaperone protein dnaK OS=Serratia proteamaculans (strain 568) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D  + P+K++A  AD     V  KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENSEGDRTTPSIIAYTQDGEILVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIVA--ADNGDAWVEVKGQ--RVAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +GNRTTPS VGFT T +RL+G AAK Q   NP NT+F  KR +GRRF +  V  + K+ P+++I    +        K  +K ++ +EIS+MVL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGNRTTPSVVGFTKTGDRLVGQAAKRQAITNPKNTIFSIKRFMGRRFDE--VGEEKKMAPYELINDSGE-----ARVKINDKVYSPQEISAMVLQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAT (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T + E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+ ++        I V    ++++ A  +IS+ VL KM++ AE YLG TIK AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENAEGDRTTPSIIAYTQEGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAI (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G+RTTPS + +T + E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+ ++        I V    ++++ A  +IS+ VL KM++ AE YLG TIK AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VLENAEGDRTTPSIIAYTQEGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFKDDEVQRDIKIMPYNIVNSDNGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGETIKEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_MARMM2.175e-3250.00Chaperone protein dnaK OS=Maricaulis maris (strain... [more]
DNAK_ENT382.175e-3252.08Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_BLOFL2.175e-3251.39Chaperone protein dnaK OS=Blochmannia floridanus G... [more]
DNAK_TOLAT2.841e-3252.08Chaperone protein dnaK OS=Tolumonas auensis (strai... [more]
DNAK_THIDA2.841e-3250.69Chaperone protein dnaK OS=Thiobacillus denitrifica... [more]
DNAK_SODGM2.841e-3250.69Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_SERP52.841e-3252.08Chaperone protein dnaK OS=Serratia proteamaculans ... [more]
DNAK_CHLCH2.841e-3251.39Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_BUCAT2.841e-3250.69Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAI2.841e-3250.69Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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