FC875687

Overview
NameFC875687
Unique NameFC875687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_DESAD (Chaperone protein dnaK OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.265e-32
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    6 IANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            + N +G RTTPS VGFTD ERL+G+ AK Q   NP  TVF  KRL+GR+ S   V+      P+ ++ G      + +    E K+++  E+S+++L ++++ AE YLG T+  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   27 VTNAEGGRTTPSIVGFTDKERLVGEIAKRQAVTNPEKTVFAIKRLMGRQASSPEVKKWADHCPYPIVDGKGGDAWVEI----EGKKYSPSEVSAIILQQLKKDAETYLGETVSEAVITVPAYFNDSQRQATKDAGRIAGLEV 164          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_VIBSL (Chaperone protein dnaK OS=Vibrio splendidus (strain LGP32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.079e-31
Identity = 71/143 (49.65%), Postives = 97/143 (67.83%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G RTT S + +T+ E L+G  AK Q   NP NT++  KRLIGRRF D  VQ D+++ PF ++   AD     V  +G++   AA ++S+ VL KM++ AE +LG  +  AVVTVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VLENAEGERTTASVIAYTEGETLVGQPAKRQAVTNPQNTLYAIKRLIGRRFEDEEVQRDIEIMPFNIVK--ADNGDAWVEAQGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDV 164          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_PROVI (Chaperone protein dnaK OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.079e-31
Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +GNRTTPS V FT   +RL+G AAK Q   NPTNT+F  KR +GR+F +  V  + K+ P+ V+    +        K  +K ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENSEGNRTTPSMVAFTKNGDRLVGQAAKRQAITNPTNTIFSIKRFVGRKFDE--VPNEKKIAPYAVVNEGGE-----ARVKINDKTYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.079e-31
Identity = 73/144 (50.69%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            ++ N +G RTTPS V FT + ERL+G AAK Q   N  NT++  KR IGR+FS+  VQ ++K  P+KVI G      + V   GE + +  +EIS+ +L+K++  AE+ LG  I  AV+TVPAYFNDSQRQATK AG IAGL V
Sbjct:   26 VLENSEGARTTPSIVAFTKSGERLVGQAAKRQAITNSKNTIYSIKRFIGRKFSE--VQEEIKRVPYKVIEGKNGDCAVEVEVAGERRVYTPQEISAFILMKLKADAESKLGEKITQAVITVPAYFNDSQRQATKAAGEIAGLEV 167          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_CHRSD (Chaperone protein dnaK OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.079e-31
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +TD  E L+G AAK Q   NP+NT++  KRLIGR+F D  VQ D+K+ P+ +    AD     V  KG +   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIIAYTDDGETLVGQAAKRQAVTNPSNTLYAIKRLIGRKFKDDVVQKDIKMVPYTI--AEADNGDAWVEVKGNK--LAPPQVSAEVLKKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.079e-31
Identity = 74/144 (51.39%), Postives = 100/144 (69.44%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +IAN++G RTTPS VGFT + ERL+G  AK Q   NP NT++  KR +GRR ++  V  +MK+ P+KV         I V  +G  K + A E+S+M+L K+++ AE YLG ++  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIANEEGGRTTPSVVGFTKSGERLVGQVAKRQAITNPENTIYSIKRFMGRRQNE--VNDEMKMVPYKV---KQQGDHIVVEAQG--KDYTAPEVSAMILQKLKKAAEDYLGTSVTEAVITVPAYFNDAQRQATKDAGKIAGLDV 162          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V FT D ERL+G  AK Q   NP  T F  KRLIGRR+ D +V+ D  L P+ ++   AD     V   G  K+++  +IS+ VL KM+E AE++LG  ++ AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:   26 VIENAEGARTTPSIVAFTEDGERLVGQPAKRQSVTNPERTFFAVKRLIGRRYDDPTVEKDKHLVPYSIVR--ADNGDAWVEADG--KKYSPSQISAFVLQKMKETAESFLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_THICR (Chaperone protein dnaK OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V + D  E L+GD+AK Q   NP NT+F  KRLIGRR  DA V+ D  +  +K+IA       + V     +K+ + +E+S+  L+KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:   26 VIPNAEGARTTPSIVAYADDGEVLVGDSAKRQAVTNPENTLFAIKRLIGRRADDAVVEKDKDMVSYKIIAADNGDAWVQVG----DKKLSPQEVSARTLMKMKKTAEDYLGHEVTEAVITVPAYFNDSQRQATKDAGKIAGLEV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_RHOFD (Chaperone protein dnaK OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+K+ A  AD     V  +G   + A +++S+ VL KM++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENSEGARTTPSIIAYQEDGEVLVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDINLMPYKIAA--ADNGDAWVEVRGN--RMAPQQVSADVLRKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
BLAST of FC875687 vs. ExPASy Swiss-Prot
Match: DNAK_POLNA (Chaperone protein dnaK OS=Polaromonas naphthalenivorans (strain CJ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31
Identity = 71/144 (49.31%), Postives = 100/144 (69.44%), Query Frame = 3
Query:    3 IIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 431
            +I N +G RTTPS V +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+ ++  PAD     +  +G  K+ +A+++S+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:   26 VIENSEGARTTPSIVAYQEDGEVLVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDIGLMPYSIV--PADNGDAWIEVRG--KKLSAQQVSADILRKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
The following BLAST results are available for this feature:
BLAST of FC875687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DESAD8.265e-3248.59Chaperone protein dnaK OS=Desulfovibrio salexigens... [more]
DNAK_VIBSL1.079e-3149.65Chaperone protein dnaK OS=Vibrio splendidus (strai... [more]
DNAK_PROVI1.079e-3149.31Chaperone protein dnaK OS=Prosthecochloris vibriof... [more]
DNAK_METI41.079e-3150.69Chaperone protein dnaK OS=Methylacidiphilum infern... [more]
DNAK_CHRSD1.079e-3152.08Chaperone protein dnaK OS=Chromohalobacter salexig... [more]
DNAK_ACIC51.079e-3151.39Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
DNAK_XANP21.410e-3152.08Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_THICR1.410e-3150.69Chaperone protein dnaK OS=Thiomicrospira crunogena... [more]
DNAK_RHOFD1.410e-3150.69Chaperone protein dnaK OS=Rhodoferax ferrireducens... [more]
DNAK_POLNA1.410e-3149.31Chaperone protein dnaK OS=Polaromonas naphthaleniv... [more]

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Properties
Property NameValue
Genbank descriptionC31401G01EF CTVClemen1 Citrus clementina cDNA clone C31401G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875687 ID=FC875687; Name=FC875687; organism=Citrus clementina; type=EST; length=433bp
AGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGG
TTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGC
CATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGA
GATTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAG
GTGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGG
CGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCA
AGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCA
GTCGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAA
GGATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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