FC875702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.944e-45 Identity = 98/200 (49.00%), Postives = 121/200 (60.50%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ---PPSH 667 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF QT ETTGGW AP G ++WGYCF E +PPS YC + +PC KYYGRGPIQL++N+NY ATD +SFK+A+WFWMT Q P SH Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSH 256 HSP 2 Score: 23.0978 bits (48), Expect = 2.944e-45 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPS H+VIT W Sbjct: 252 KPSSHDVITGRW 263
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.946e-45 Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 164 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYCN-LNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ---PPSH 667 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ + +E+AAF AQT ETTGGW AP G YAWGYCF+SE + YC+ ++PC KYYGRGPIQLT NYNY +T+P +SFK+AIWFWMT Q P SH Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSH 246 HSP 2 Score: 24.6386 bits (52), Expect = 2.946e-45 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 655 ATKPSCHEVITDEW 696 A KPS H+VIT W Sbjct: 240 ANKPSSHDVITGRW 253
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.946e-45 Identity = 93/186 (50.00%), Postives = 112/186 (60.22%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T R REIAAF AQT ETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q P Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSP 231 HSP 2 Score: 26.9498 bits (58), Expect = 2.946e-45 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH+VIT W Sbjct: 232 KPSCHDVITGRW 243
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 3.194e-44 Identity = 92/174 (52.87%), Postives = 110/174 (63.22%), Query Frame = 2 Query: 170 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 673 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R RE+AAF AQT ETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHA 248 HSP 2 Score: 23.8682 bits (50), Expect = 3.194e-44 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 655 ATKPSCHEVITDEW 696 A KPS H VIT +W Sbjct: 241 APKPSSHAVITGQW 254
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 174.096 bits (440), Expect = 1.200e-43 Identity = 98/205 (47.80%), Postives = 119/205 (58.05%), Query Frame = 2 Query: 119 CGSGVVCGE----RDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 673 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G R RE+AAF AQT ETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHA 245 HSP 2 Score: 23.8682 bits (50), Expect = 1.200e-43 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 655 ATKPSCHEVITDEW 696 A KPS H VIT +W Sbjct: 238 APKPSSHAVITGQW 251
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.663e-43 Identity = 89/177 (50.28%), Postives = 108/177 (61.02%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 673 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R R++AAF AQT ETTGGW AP G +AWGYCF E + YC + +PC +YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHA 193 HSP 2 Score: 23.483 bits (49), Expect = 2.663e-43 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 655 ATKPSCHEVITDEW 696 A KPS H VIT +W Sbjct: 186 APKPSSHAVITGKW 199
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.828e-43 Identity = 90/177 (50.85%), Postives = 108/177 (61.02%), Query Frame = 2 Query: 161 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQP--PSHHA 673 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ + RE+AAF AQT ETTGGW AP G +AWGYCF E S YC + +PC +YYGRGPIQL+ NYNY ATD + FK+AIWFWMTAQP PS HA Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHA 193
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.877e-42 Identity = 89/197 (45.18%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 119 CGSGVVCGERDTGH----------GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEI--SPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 CGSG C + +G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ R RE+AAF AQT ETTGGW AP G Y+WGYCF E + S YC + +PC KYYGRGPIQ+++NYNY A+D +SFK+A WFWMT Q P Sbjct: 51 CGSG--CQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSP 243 HSP 2 Score: 25.409 bits (54), Expect = 2.877e-42 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH V+T +W Sbjct: 244 KPSCHAVMTGQW 255
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.400e-41 Identity = 82/169 (48.52%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 179 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPSHHA 673 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT ETTGGW AP G Y+WGYC+ E P YC + +PC KY+GRGPIQ+++NYNY A D V+SFK+A+WFWMTAQ P A Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSA 171 HSP 2 Score: 23.483 bits (49), Expect = 2.400e-41 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPS H+VIT W Sbjct: 168 KPSAHDVITGRW 179
BLAST of FC875702 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 5.289e-41 Identity = 87/187 (46.52%), Postives = 108/187 (57.75%), Query Frame = 2 Query: 119 CGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGRETTGGWRDAPGGEYAWGYCFISEISPPSP-YC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ RE+AAF AQT ETTGGW AP G Y+WGYCF E + +P YC +PC KYYGRGPIQ+T+NYNY A+D +SFK+A WFWMT Q P Sbjct: 57 CSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSP 239 HSP 2 Score: 26.5646 bits (57), Expect = 5.289e-41 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 KPSCHEVITDEW 696 KPSCH VIT +W Sbjct: 240 KPSCHAVITGQW 251 The following BLAST results are available for this feature:
BLAST of FC875702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875702 ID=FC875702; Name=FC875702; organism=Citrus clementina; type=EST; length=696bpback to top |