FC875704

Overview
NameFC875704
Unique NameFC875704
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y RLA K+HPD  K+ + A  +F+E+ EAY+VLSD  KR +YD  G
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEEN-AVEKFKEVQEAYEVLSDEQKRAQYDQFG 69          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A+++EI+  Y +LA+K+HPD+  D   A  +F+E +EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ2_SYNY3 (Chaperone protein dnaJ 2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSK 374
            ++YY+IL V  +AT EEI+ ++ +LA ++HPD   +   A  +F++INEAY VLSD  KRRE DS+
Sbjct:    5 RNYYQILGVPRNATAEEIKKSFRKLARQYHPDVNPNDKTAEEKFKDINEAYDVLSDETKRRELDSR 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNJ39_ARATH (Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  186 YKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            Y++L +  ++T++EI+S Y R+AL++HPDK  D   A   F+E+  AY+VLSDP  RR YD+ G
Sbjct:   25 YEVLGIPSNSTDQEIKSAYRRMALRYHPDKNPDDPVAAEMFKEVTFAYEVLSDPENRRLYDTTG 88          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLPP (Chaperone protein dnaJ OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYY +LEV  +A+ +EI+  Y +LALK+HPD+      A  +F+E+  AY+VLSD  KR  YD  G
Sbjct:    4 KDYYDLLEVSRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEVTAAYEVLSDSEKRAGYDRYG 70          
The following BLAST results are available for this feature:
BLAST of FC875704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
DNAJ_BACCN4.869e-1147.76Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_ACIBY4.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT4.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS4.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC4.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB54.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB34.869e-1144.78Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ2_SYNY34.869e-1148.48Chaperone protein dnaJ 2 OS=Synechocystis sp. (str... [more]
DNJ39_ARATH6.359e-1146.88Chaperone protein dnaJ 39 OS=Arabidopsis thaliana ... [more]
DNAJ_WOLPP6.359e-1147.76Chaperone protein dnaJ OS=Wolbachia pipientis subs... [more]

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Properties
Property NameValue
Genbank descriptionC31401H06EF CTVClemen1 Citrus clementina cDNA clone C31401H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875704 ID=FC875704; Name=FC875704; organism=Citrus clementina; type=EST; length=696bp
GAAGCGCTTAAGCCTTTGTAACTAGTTTTGAGCTCTATTGTCTGTCTCGT
GTTTGTGTCCCCTCTACTACAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACACAACAGGATTCCCATATCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTTAATATGTATTGCGATAACTTGAATGCCCTT
GTATAATAGAAACCAATGCTAAAACATCGTTGTGTAACAGCTAATGCCTG
CCAATTTGGGGTTACATTGTCCAAAAAAAAAAAAAAAAAAAAAAAA
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