FC875704

Overview
NameFC875704
Unique NameFC875704
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP7 (Chaperone protein dnaJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY+IL V   A E EI+  Y RLA+K+HPD+ +    A ++F+EI EAY++L+D  KR  YD  G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP3 (Chaperone protein dnaJ OS=Klebsiella pneumoniae (strain 342) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY+IL V   A E EI+  Y RLA+K+HPD+ +    A ++F+EI EAY++L+D  KR  YD  G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_IDILO (Chaperone protein dnaJ OS=Idiomarina loihiensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +D+Y++L V  DA E +I+  Y R+A+K+HPD+ +       +F+EI +AY+VLSDP KR+ YD  G
Sbjct:    4 QDFYQVLGVSKDANERDIKKAYKRMAMKYHPDRTEGDKDMEIKFKEIKQAYEVLSDPQKRQMYDQYG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_HERAR (Chaperone protein dnaJ OS=Herminiimonas arsenicoxydans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +D+Y+IL +  +A++EEI+  Y +LA+K HPD+  D   A  +F+E  EAY++LSDP KR  YD  G
Sbjct:    4 RDFYEILGLGKNASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein dnaJ OS=Enterococcus faecalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +A  +DYY++L +   A+++EI+  Y +L+ K+HPD  K+ D A  +F+E++EAY+VLSDP K+  YD  G
Sbjct:    1 MATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEAD-AEEKFKEVSEAYEVLSDPQKKAAYDQYG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  180 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            DYY +L V   A+ EEI+  Y +LA+K+HPDK      A  RF+E++EAY+VLSD  KR  YD  G
Sbjct:    2 DYYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYG 67          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTN (Chaperone protein dnaJ OS=Bacteroides thetaiotaomicron GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +A+ +DYY++LEV   AT EEI+  Y + A+++HPDK      A  +F+E  EAY VLS+P KR  YD  G
Sbjct:    1 MAEKRDYYEVLEVTKTATVEEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSNPDKRSRYDQFG 71          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_BACFR (Chaperone protein dnaJ OS=Bacteroides fragilis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +A+ +DYY++LEV  ++T EEI+  Y + A+++HPDK      A  +F+E  EAY VLS+P KR  YD  G
Sbjct:    1 MAEKRDYYEVLEVTKESTVEEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSNPDKRARYDQFG 71          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_BACFN (Chaperone protein dnaJ OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +A+ +DYY++LEV  ++T EEI+  Y + A+++HPDK      A  +F+E  EAY VLS+P KR  YD  G
Sbjct:    1 MAEKRDYYEVLEVTKESTVEEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSNPDKRARYDQFG 71          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTPJ (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYY++L +   A+E +I+  Y RLA K HPDK +    A  +F+EINEAY+VL D  KR  YD  G
Sbjct:    4 KDYYEVLGLQKGASENDIKRAYKRLASKHHPDKNQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYG 70          
The following BLAST results are available for this feature:
BLAST of FC875704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
DNAJ_KLEP76.359e-1147.76Chaperone protein dnaJ OS=Klebsiella pneumoniae su... [more]
DNAJ_KLEP36.359e-1147.76Chaperone protein dnaJ OS=Klebsiella pneumoniae (s... [more]
DNAJ_IDILO6.359e-1144.78Chaperone protein dnaJ OS=Idiomarina loihiensis GN... [more]
DNAJ_HERAR6.359e-1146.27Chaperone protein dnaJ OS=Herminiimonas arsenicoxy... [more]
DNAJ_ENTFA6.359e-1143.66Chaperone protein dnaJ OS=Enterococcus faecalis GN... [more]
DNAJ_CHLFF6.359e-1150.00Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_BACTN6.359e-1146.48Chaperone protein dnaJ OS=Bacteroides thetaiotaomi... [more]
DNAJ_BACFR6.359e-1145.07Chaperone protein dnaJ OS=Bacteroides fragilis GN=... [more]
DNAJ_BACFN6.359e-1145.07Chaperone protein dnaJ OS=Bacteroides fragilis (st... [more]
DNAJ_ACTPJ6.359e-1149.25Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionC31401H06EF CTVClemen1 Citrus clementina cDNA clone C31401H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875704 ID=FC875704; Name=FC875704; organism=Citrus clementina; type=EST; length=696bp
GAAGCGCTTAAGCCTTTGTAACTAGTTTTGAGCTCTATTGTCTGTCTCGT
GTTTGTGTCCCCTCTACTACAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACACAACAGGATTCCCATATCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTTAATATGTATTGCGATAACTTGAATGCCCTT
GTATAATAGAAACCAATGCTAAAACATCGTTGTGTAACAGCTAATGCCTG
CCAATTTGGGGTTACATTGTCCAAAAAAAAAAAAAAAAAAAAAAAA
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