FC875704

Overview
NameFC875704
Unique NameFC875704
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYYKIL +   A E+EI+  Y ++ALK+HPDK K+ + A  +F+EI EAY VLSDP KR  YD  G
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN-AEEKFKEIAEAYDVLSDPKKRSLYDQYG 68          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY++L V   A ++EI+  Y +LALK+HPDK  D   A   F+E+NEAY+VLS+  KRR YD  G
Sbjct:    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 32/71 (45.07%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            ++  +DYY++L V  DAT+++I+S + + A+++HPD+ K+ D A  +F+E+N+AY+VLSDP KR  YD  G
Sbjct:    1 MSSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPD-AEEKFKEVNQAYEVLSDPDKRANYDRFG 70          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein dnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYY+IL +  +A E++I+  Y RLA K+HPD+ KD+D A ++F+E+ EAY+VLSD  KR  YD  G
Sbjct:    4 KDYYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKD-AETKFKEMKEAYEVLSDQQKRAAYDQHG 69          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +DYY+IL V   A ++EI+  Y +LALK+HPDK  D   A  +F+E+NEAY+VLS+  KRR YD  G
Sbjct:    3 RDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_ACEP3 (Chaperone protein dnaJ OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  165 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            +A   DYY ILEV   AT +E++ +Y +LA+K+HPD+    D A ++F+EIN+AY +L D  KR  YD  G
Sbjct:    1 MATQLDYYAILEVSRTATADELKKSYRKLAMKYHPDRNPGDDAAEAKFKEINQAYDILKDEQKRAAYDQYG 71          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYYKIL +   A E+EI+  Y ++ALK+HPDK K+ + A  +F+EI EAY VLSDP KR  YD  G
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN-AEEKFKEIAEAYDVLSDPKKRGLYDQYG 68          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYYKIL +   A E+EI+  Y ++ALK+HPDK K+ + A  +F+EI EAY VLSDP KR  YD  G
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN-AEEKFKEIAEAYDVLSDPKKRGLYDQYG 68          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDK-QKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 377
            KDYY+IL V  +A++EEIR  Y +L  KWHPD+  ++R  A  +F+EI EAY+VLSDP KR  YD  G
Sbjct:    4 KDYYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRKEAEEKFKEIQEAYEVLSDPEKRAMYDRFG 71          
BLAST of FC875704 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 3
Query:  177 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYD 368
            KDYY+IL V  DAT EEI+  Y RLA ++HPD   D + A+ +F+EINEAY +LSD  +R+EYD
Sbjct:    4 KDYYQILGVSKDATAEEIKKAYRRLAKEYHPDISADEN-ASEKFKEINEAYHILSDEERRKEYD 66          
The following BLAST results are available for this feature:
BLAST of FC875704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
DNJB5_MOUSE1.159e-1255.22DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNAJ_PELLD1.159e-1250.75Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_MYCPE1.159e-1245.07Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNAJ_HAMD51.159e-1252.24Chaperone protein dnaJ OS=Hamiltonella defensa sub... [more]
DNAJ_CHLTE1.159e-1252.24Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_ACEP31.159e-1246.48Chaperone protein dnaJ OS=Acetobacter pasteurianus... [more]
DNJB5_HUMAN1.514e-1255.22DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN1.514e-1255.22DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ_THEAB1.514e-1254.41Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_HYDTH1.514e-1256.25Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]

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Properties
Property NameValue
Genbank descriptionC31401H06EF CTVClemen1 Citrus clementina cDNA clone C31401H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875704 ID=FC875704; Name=FC875704; organism=Citrus clementina; type=EST; length=696bp
GAAGCGCTTAAGCCTTTGTAACTAGTTTTGAGCTCTATTGTCTGTCTCGT
GTTTGTGTCCCCTCTACTACAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACACAACAGGATTCCCATATCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTTAATATGTATTGCGATAACTTGAATGCCCTT
GTATAATAGAAACCAATGCTAAAACATCGTTGTGTAACAGCTAATGCCTG
CCAATTTGGGGTTACATTGTCCAAAAAAAAAAAAAAAAAAAAAAAA
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